Open mmsoda opened 1 day ago
Hi Lewis I am running the example notebook and the following error appeared.
{ "name": "ImportError", "message": "cannot import name '_collect_type_vars' from 'typing' (/home/zz/anaconda3/envs/my_env_with_qsartuna/lib/python3.11/typing.py)", "stack": "--------------------------------------------------------------------------- ImportError Traceback (most recent call last) Cell In[1], line 1 ----> 1 from qsartuna.three_step_opt_build_merge import ( 2 optimize, 3 buildconfig_best, 4 build_best, 5 build_merged, 6 ) 7 from qsartuna.config import ModelMode, OptimizationDirection 8 from qsartuna.config.optconfig import ( 9 OptimizationConfig, 10 SVR, (...) 14 XGBRegressor, 15 ) File ~/anaconda3/envs/my_env_with_qsartuna/lib/python3.11/site-packages/qsartuna/__init__.py:8 5 import optunaz 6 from optunaz import * ----> 8 import optunaz.config.optconfig 9 import optunaz.config.buildconfig 10 import optunaz.descriptors File ~/anaconda3/envs/my_env_with_qsartuna/lib/python3.11/site-packages/optunaz/config/__init__.py:9 6 from pathlib import Path 7 from typing import Optional, Any, Dict ----> 9 from apischema import deserialize 11 from optunaz.utils import mkdict 13 current_module_dir = os.path.dirname(os.path.abspath(__file__)) File ~/anaconda3/envs/my_env_with_qsartuna/lib/python3.11/site-packages/apischema/__init__.py:30 1 __all__ = [ 2 \"PassThroughOptions\", 3 \"Undefined\", (...) 25 \"validator\", 26 ] 28 import warnings ---> 30 from . import ( # noqa: F401 31 cache, 32 conversions, 33 dataclasses, 34 fields, 35 json_schema, 36 metadata, 37 objects, 38 skip, 39 tagged_unions, 40 validation, 41 ) 42 from .aliases import alias 43 from .conversions import deserializer, serializer File ~/anaconda3/envs/my_env_with_qsartuna/lib/python3.11/site-packages/apischema/cache.py:6 3 from functools import lru_cache 4 from typing import Callable, Iterator, MutableMapping, TypeVar, cast ----> 6 from apischema.utils import type_dict_wrapper 8 _cached: list = [] 10 Func = TypeVar(\"Func\", bound=Callable) File ~/anaconda3/envs/my_env_with_qsartuna/lib/python3.11/site-packages/apischema/utils.py:37 11 from typing import ( 12 AbstractSet, 13 Any, (...) 33 cast, 34 ) 36 from apischema.types import COLLECTION_TYPES, MAPPING_TYPES, PRIMITIVE_TYPES, AnyType ---> 37 from apischema.typing import ( 38 _collect_type_vars, 39 generic_mro, 40 get_args, 41 get_origin, 42 get_type_hints, 43 is_annotated, 44 is_type_var, 45 is_union, 46 typing_origin, 47 ) 49 try: 50 from apischema.typing import Annotated File ~/anaconda3/envs/my_env_with_qsartuna/lib/python3.11/site-packages/apischema/typing.py:98 95 pass 97 if sys.version_info >= (3, 7): ---> 98 from typing import _collect_type_vars # type: ignore 99 else: 100 from typing import _type_vars as _collect_type_vars ImportError: cannot import name '_collect_type_vars' from 'typing' (/home/zz/anaconda3/envs/my_env_with_qsartuna/lib/python3.11/typing.py)" }
I checked the typing.py file and only the _collect_parameters function was available. Do you guys get the same error when running the code? Many thanks
I downgraded the QSARtuna version (to 3.1.2) then everything is working as expected.
Hi Lewis I am running the example notebook and the following error appeared.
I checked the typing.py file and only the _collect_parameters function was available. Do you guys get the same error when running the code? Many thanks