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MonashBioinformaticsPlatform / RNAsik-pipe

RNAsik - more than just a pipeline
https://monashbioinformaticsplatform.github.io/RNAsik-pipe/
Apache License 2.0
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How to include gene descriptions ? #49

Open tseemann opened 5 years ago

tseemann commented 5 years ago

image

Any chance you could add the gene 'Description` to the output Degust table?

eg.

>ENST00000390463.3 cdna chromosome:GRCh38:14:22226746:22227254:1 
gene:ENSG00000211815.3 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene
gene_symbol:TRAV36DV7 
description:T cell receptor alpha variable 36/delta variable 7 [Source:HGNC Symbol;Acc:HGNC:12135]
ACTTGATAACTGAAGGATGATGAAGTGTCCACAGGCTTTACTAGCTATCTTTTGGCTTCT
ACTGAGCTGGGTGAGCAGTGAAGACAAGGTGGTACAAAGCCCTCTATCTCTGGTTGTCCA