MouseLand / cellpose

a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
https://www.cellpose.org/
BSD 3-Clause "New" or "Revised" License
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Cell pose graph from plot.show_segmentation #1048

Open antopHU opened 2 weeks ago

antopHU commented 2 weeks ago

Hi, I’m wondering how to extract the underlying data from the "cell pose" plot generated by the plot.show_segmentation function. Sometimes, I notice significant differences between the segmentation displayed in that plot and the actual mask that’s produced. Could you tell why this discrepancy occurs?

Thank you in advance