MouseLand / cellpose

a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
https://www.cellpose.org/
BSD 3-Clause "New" or "Revised" License
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Add norm percentiles as CLI argument #1058

Open TheBestDestroyer opened 1 week ago

TheBestDestroyer commented 1 week ago

Added the arg of norm percentiles to CLI options. Currently it only supports norm percentiles but could be extended to also support the other normalization options.

Base motivation was to enable this feature for solving issues on pictures with applied threshold and sparse data, as it is here a good way to tinker with the values. (Also possible in GUI, but not in CLI).

Loosely related #549 an the blog article here.