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Updated MVP2 Qualifier - ARAGORN #895

Open sstemann opened 1 month ago

sstemann commented 1 month ago

I ran MVP2, what gene may be increased by Potassium in CI and in Test.

CI has an updated query graph that includes

         "qualifier_type_id": "biolink:qualified_predicate",
          "qualifier_value": "biolink:causes"

Which is not included in Test. Test has been updated to Fugu.

In CI, ARAGORN returns 284 results, all of which to be one-hop

In Test, ARAGORN returns 39, 38 of which seem to have inferred graphs/multi-hop

I'm not sure if this is an environmental issue, a query graph issue, or a Fugu issue. For the CI PK, the ARAX GUI reports "ERROR: omnicorp HTML error status code 500 returned." For the Test PK, the ARAX GUI does not report that error

CI: https://ui.ci.transltr.io/main/results?l=Potassium&i=CHEBI:26216&t=3&r=0&q=7e8cc9fb-bdd1-4641-9307-f4c966f56c5c image

Test: https://ui.test.transltr.io/main/results?l=Potassium&i=CHEBI:26216&t=3&r=0&q=6ce23b20-b150-471b-8350-0c23f1b83520 image

Updating this to include this same behavior (all one-hops in CI, multi-hops in Test) for What chemicals may increase the activity of: TNF

CI: https://ui.ci.transltr.io/main/results?l=TNF%20(Human)&i=NCBIGene:7124&t=1&r=0&q=7b0b231b-bd0f-4a83-93cc-b5ba2bdf68f4 image

Test: https://ui.test.transltr.io/main/results?l=TNF%20(Human)&i=NCBIGene:7124&t=1&r=0&q=7d04bf45-933c-4fda-8f3b-3673af548235 image image