TEGS4_Additional analysis on RNA-seq data (i.e. RNA-seq part 2)

NCI-CCDI / CCDITEGS_Bioinformatics

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Open Krithika-Bhuvan opened 11 months ago

Krithika-Bhuvan commented 11 months ago

Additional analysis requested by Ukhyun on Dec 13, 2023

GSEA using FC as ranking criteria from control vs Pralatrexate for RD and RH30 cell lines
Get overlapping genes from each venn diagram
Add gene symbol and Adjusted p-value to the DEG detailed list for each comparison
Add gene symbol to overlapping genes (currently in the form of ensembl id) in enrichment analysis