update to use SAC prevalence for amis

NTD-Modelling-Consortium / ntd-model-sch

NTD SCH model

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update to use SAC prevalence for amis #76

Closed mattg3004 closed 2 weeks ago

mattg3004 commented 3 weeks ago

AMIS for SCH/STH model fits to whole population prevalence to the data, but this data is for school age children. Change the output of the model for the AMIS model to be school age children not whole population prevalence.

thk123 commented 2 weeks ago

@mattg3004 in the interest of time I took the liberty of addressing my own comments, I hope the changes make sense - but feel free to ask any questions if not :)

thk123 commented 2 weeks ago

@mattg3004 I have merged this version into the branch @evandrokonzen is using for re-doing the fitting.

mattg3004 commented 2 weeks ago

this changes all make sense