Nagasaki45 / bibo

Command line reference manager with a single source of truth: the .bib file. Inspired by beets.
MIT License
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bibo list fails #79

Closed rhaynes74 closed 3 years ago

rhaynes74 commented 3 years ago

Hi folks, new bibo user here. I exported my .bib file from zotero and ran bibo --database=file list and it scrolls through a ton of files and then fails with:

ZouDelayinducedtraveling2002 šŸ“ Zou, Xingfu (2002). Delay Induced Traveling Wave Fronts in Reacti on Diffusion Equations of {{KPP}}-{{Fisher}} Type ZuluagaModelingoptimizationtheory2013 šŸ“ šŸ”— Modeling and Optimization: Theory and Applications (2013)
bibtex failed. Using a fallback citation method. Use --verbose for more information

I tried the --verbose flag but it doesn't seem to work. Suggestions?

Nagasaki45 commented 3 years ago

Hi @rhaynes74! Welcome to bibo and thanks for getting involved. It looks like bibtex failed to process the citations. Can you run the command with the --verbose flag again and check the top of the output? For example, try bibo --database=file list --verbose | head -n 50. The bibtex output to the standard error should appear at the top. Yes, it's a bit annoying that the error appears in one place and the debugging information at another. Let's solve your issue first and we can discuss improving the errors / warnings.

rhaynes74 commented 3 years ago

Hi - many thanks for the response.Ā Ā I managed to clean up the zotero output and in this case bibo list now works.Ā  Ā  Ā Workflow suggestions?

Sincerely,

Dr. Ronald D. Haynes

Professor, Department of Mathematics and Statistics Chair, MSc and PhD Scientific Computing Programs Memorial University of Newfoundland

We acknowledge that the lands onĀ which Memorial Universityā€™sĀ campuses are situated are in theĀ traditional territories of diverseĀ Indigenous groups, and weĀ acknowledge with respect the diverseĀ histories and cultures of the Beothuk,Ā Miā€™kmaq, Innu, and Inuit of thisĀ province. On Dec 20, 2020, 2:34 PM -0330, Tom Gurion notifications@github.com, wrote:

Hi @rhaynes74! Welcome to bibo and thanks for getting involved. It looks like bibtex failed to process the citations. Can you run the command with the --verbose flag again and check the top of the output? For example, try bibo --database=file list --verbose | head -n 50. The bibtex output to the standard error should appear at the top. Yes, it's a bit annoying that the error appears in one place and the debugging information at another. Let's solve your issue first and we can discuss improving the errors / warnings. ā€” You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub, or unsubscribe.

Nagasaki45 commented 3 years ago

Happy to hear it's working now. Can you please tell what bits of the .bib file caused the problem?

Regarding workflow, take a look at the quick start guide. To be honest, there's no much beyond that.

I'm closing this issue now. Feel free to reopen if needed.

Cheers, Tom