NeuralAnalysis PyalData issues

NeuralAnalysis / PyalData

Repository for the Python implementation of the TrialData analysis library.

GNU General Public License v3.0

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specify dimesions in rebinnig data

#150 AtMostafa opened 2 weeks ago
0
1D time series

#149 AtMostafa opened 2 weeks ago
0
scipy.signal.gaussian was moved to scipy.signal.windows.gaussian

#148 bagibence closed 2 weeks ago
1
Require all elements of a field to be 0d arrays for converting to scalar

#147 bagibence closed 2 weeks ago
1
Update github actions

#146 bagibence closed 2 weeks ago
0
Add `get_trial_lengths` and extend `get_trial_length` to handle dataframes

#145 bagibence closed 2 weeks ago
0
Add github action to lint with ruff

#144 bagibence closed 5 months ago
0
Set up running tests on push

#143 bagibence closed 5 months ago
0
Add type hints

#142 bagibence closed 5 months ago
0
Update time_average and add tests

#141 bagibence closed 5 months ago
0
Format with black/ruff and add config for them in pyproject.toml

#140 bagibence closed 5 months ago
0
Improve `get_time_varying_fields`

#139 bagibence closed 5 months ago
0
Fix import of add_gradient and add_norm, and format

#138 bagibence closed 5 months ago
0
Add `split_array` and `reverse_concat` functions

#137 bagibence closed 1 year ago
0
bug in `get_time_varying_fields`

#136 JoannaChang closed 5 months ago
1
fix(iss134): fix bug in restrict_to_interval that produces strange behavior with epoch_fun

#135 raeedcho closed 1 year ago
1
`restrict_to_interval` has weird behavior when `epoch_fun` output depends on the arrays to be trimmed

#134 raeedcho closed 1 year ago
4
Add `add_speed` function in signals.py

#133 bagibence closed 2 years ago
0
Fix norm of 1D signals

#132 bagibence closed 2 years ago
0
Norm of 1D signal fails

#131 bagibence closed 2 years ago
0
Add option to specify backend for smoothing

#130 raeedcho closed 2 years ago
1
[Question] Why is restrict_to_interval inclusive on both ends of the specified slice?

#129 raeedcho opened 2 years ago
2
Consider using DataFrame index to flag problematic trials in warnings

#128 raeedcho opened 2 years ago
2
Deep copy in `copy_td`

#127 bagibence opened 2 years ago
1
Change KeyValue reference to positional references in firing_rates.py

#126 raeedcho closed 2 years ago
1
KeyValue errors from trying to refer to first value of trial_data column

#125 raeedcho closed 2 years ago
2
Add split_array and reverse_concat functions

#124 bagibence closed 2 years ago
0
Add expand_field_in_time function

#123 bagibence closed 2 years ago
0
Update demo notebook

#122 bagibence closed 3 years ago
0
Continue moving code into smaller modules

#121 bagibence closed 3 years ago
0
Refractor code into smaller modules

#120 bagibence closed 3 years ago
6
Partially refactor code for modularity

#119 raeedcho closed 3 years ago
1
New smoothing function is slower than previous one (for my data)

#118 raeedcho closed 2 years ago
5
fix(norm_gauss_window): increase length of gaussian window to 10 standard deviations to avoid jaggedness

#117 raeedcho closed 3 years ago
0
Smoothing functions applied to spike data result in still-jagged outputs

#116 raeedcho closed 3 years ago
1
Revert "Use pandas's missing data features"

#115 bagibence closed 3 years ago
0
Using hierarchical indexing/MultiIndices to put timepoints of timevarying signals on individual rows?

#114 raeedcho closed 3 years ago
5
Use pandas's missing data features

#113 bagibence closed 3 years ago
2
`restrict_to_interval` does not work for individual trials

#112 raeedcho opened 3 years ago
4
`clean_integer_fields` cannot convert `idx_...` field to integer sometimes

#111 raeedcho opened 3 years ago
2
Add 'vel' and 'vel_norm' when calculating movement onset

#110 bagibence closed 3 years ago
1
Clean fields when loading

#109 bagibence closed 3 years ago
0
Fix zero division in z-scoring

#108 AtMostafa closed 3 years ago
1
zero firing rate units in `z_score_signal`

#107 AtMostafa closed 2 years ago
6
Speed up smoothing by using `scipy.ndimage.convolve1d`

#106 bagibence closed 3 years ago
1
Add `generate_epoch_fun`

#105 bagibence closed 3 years ago
0
Fix Index error in `restrict_to_interval`

#104 AtMostafa closed 3 years ago
1
Index error for `utils.slice_between_points` when using last time step

#103 JoannaChang closed 2 years ago
1
Index error in `restrict_to_interval`

#102 AtMostafa closed 3 years ago
1
Improve smoothing speed

#101 babaf closed 3 years ago
1