Open-Systems-Pharmacology / InstallationValidator

Installation Validation Tool for the Open Systems Pharmacology Suite
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Error in creation of a validation report #241

Closed zt1947 closed 2 years ago

zt1947 commented 2 years ago

I downloaded OSP 10, InstallationValidator 10.0 & Gene expression database (human). After the installation of OSP 10 was completed I ran the Validation. This resulted in the following error:

Report could not be created. Please see log for details located under 'C:\Users\zteit\AppData\Roaming\Open Systems Pharmacology\InstallationValidator\10.0\Outputs\91ea20d2-1e9f-4074-90de-23bf54100bfc' For more information or questions, please visit the Open Systems Pharmacology Forum (http://forum.open-systems-pharmacology.org). Stack trace: at OSPSuite.TeXReporting.ReportCompiler.d2.MoveNext() --- End of stack trace from previous location where exception was thrown --- at System.Runtime.ExceptionServices.ExceptionDispatchInfo.Throw() at System.Runtime.CompilerServices.TaskAwaiter.HandleNonSuccessAndDebuggerNotification(Task task) at System.Runtime.CompilerServices.TaskAwaiter.GetResult() at OSPSuite.TeXReporting.ReportCreator.d6`1.MoveNext() --- End of stack trace from previous location where exception was thrown --- at System.Runtime.ExceptionServices.ExceptionDispatchInfo.Throw() at System.Runtime.CompilerServices.TaskAwaiter.HandleNonSuccessAndDebuggerNotification(Task task) at System.Runtime.CompilerServices.TaskAwaiter.GetResult() at OSPSuite.Infrastructure.Reporting.ReportingTask.d6.MoveNext() --- End of stack trace from previous location where exception was thrown --- at System.Runtime.ExceptionServices.ExceptionDispatchInfo.Throw() at System.Runtime.CompilerServices.TaskAwaiter.HandleNonSuccessAndDebuggerNotification(Task task) at System.Runtime.CompilerServices.TaskAwaiter.GetResult() at InstallationValidator.Core.Services.ValidationReportingTask.d6.MoveNext() --- End of stack trace from previous location where exception was thrown --- at System.Runtime.ExceptionServices.ExceptionDispatchInfo.Throw() at System.Runtime.CompilerServices.TaskAwaiter.HandleNonSuccessAndDebuggerNotification(Task task) at System.Runtime.CompilerServices.TaskAwaiter.GetResult() at InstallationValidator.Core.Presentation.MainPresenter.d__11.MoveNext()

msevestre commented 2 years ago

Can you attach said logfile? (You might have to zip the folder)

zt1947 commented 2 years ago

At the indicated address there is no log file, enclosed is a snapshot of that location: [image: image.png] I did find the enclosed batchlog file at

[image: image.png]

Hope this helps Zvi

On Sun, Dec 5, 2021 at 6:33 PM Michael Sevestre @.***> wrote:

Can you attach said logfile? (You might have to zip the folder)

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/Open-Systems-Pharmacology/InstallationValidator/issues/241#issuecomment-986261193, or unsubscribe https://github.com/notifications/unsubscribe-auth/AGDF72TYSZ44PAVVJHDANUTUPOH6TANCNFSM5JM6NOTQ . Triage notifications on the go with GitHub Mobile for iOS https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675 or Android https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub.

msevestre commented 2 years ago

Images are not attached via emails. Please go to folder C:\Users\zteit\AppData\Roaming\Open Systems Pharmacology\InstallationValidator\10.0\Outputs\91ea20d2-1e9f-4074-90de-23bf54100bfc' and zip the content and attach it here

zt1947 commented 2 years ago

Dear Michael I hope you have received the zipped file you requested to address my Issue. Sincerely Zvi

On Sun, Dec 5, 2021 at 8:07 PM Michael Sevestre @.***> wrote:

Images are not attached via emails. Please go to folder C:\Users\zteit\AppData\Roaming\Open Systems Pharmacology\InstallationValidator\10.0\Outputs\91ea20d2-1e9f-4074-90de-23bf54100bfc' and zip the content and attach it here

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/Open-Systems-Pharmacology/InstallationValidator/issues/241#issuecomment-986274939, or unsubscribe https://github.com/notifications/unsubscribe-auth/AGDF72QFISZZQZDVBLWQA3TUPOS6JANCNFSM5JM6NOTQ . Triage notifications on the go with GitHub Mobile for iOS https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675 or Android https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub.

zt1947 commented 2 years ago

Dear Michael Enclosed please find the zipped file that you requested I would be very grateful if you confirm its receipt Sincerely Zvi

On Sun, Dec 5, 2021 at 6:33 PM Michael Sevestre @.***> wrote:

Can you attach said logfile? (You might have to zip the folder)

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/Open-Systems-Pharmacology/InstallationValidator/issues/241#issuecomment-986261193, or unsubscribe https://github.com/notifications/unsubscribe-auth/AGDF72TYSZ44PAVVJHDANUTUPOH6TANCNFSM5JM6NOTQ . Triage notifications on the go with GitHub Mobile for iOS https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675 or Android https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub.

msevestre commented 2 years ago

@zt1947 you need to attach the file to the GitHub issue. Using your email client (reply) removes the attachment

zt1947 commented 2 years ago

91ea20d2-1e9f-4074-90de-23bf54100bfc (2).zip

zt1947 commented 2 years ago

Thanks, I hope you can see it now

On Wed, Dec 8, 2021 at 4:47 PM Michael Sevestre @.***> wrote:

@zt1947 https://github.com/zt1947 you need to attach the file to the GitHub issue. Using your email client (reply) removes the attachment

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub https://github.com/Open-Systems-Pharmacology/InstallationValidator/issues/241#issuecomment-988878681, or unsubscribe https://github.com/notifications/unsubscribe-auth/AGDF72XLBOKV6IY4O36VSL3UP5VY7ANCNFSM5JM6NOTQ . Triage notifications on the go with GitHub Mobile for iOS https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675 or Android https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub.

msevestre commented 2 years ago

There is not log file so I can't say what went wrong however the content of the pdf is visible


\chapter{Installation Validation Results}
\label{001ca231b3954b0080ec782514257f75}
\Needspace{6\baselineskip}
\paragraph*{Overall Validation Result\newline }
\label{2bcaf66ae2c142f89ba9dcd0d0c49730}
\definecolor{theColor}{RGB}{0,128,0}\textcolor{theColor}{Valid}
``

Specifically it says the validation overall is Valid. So unless you need the report, you are good to go. OTherwise, I would suggest ot run the validationn again and hope for the best
zt1947 commented 2 years ago

Thanks

On Wed, Dec 8, 2021 at 8:16 PM Michael Sevestre @.***> wrote:

There is not log file so I can't say what went wrong however the content of the pdf is visible

\chapter{Installation Validation Results} \label{001ca231b3954b0080ec782514257f75} \Needspace{6\baselineskip} \paragraph*{Overall Validation Result\newline } \label{2bcaf66ae2c142f89ba9dcd0d0c49730} \definecolor{theColor}{RGB}{0,128,0}\textcolor{theColor}{Valid} ``

Specifically it says the validation overall is Valid. So unless you need the report, you are good to go. OTherwise, I would suggest ot run the validationn again and hope for the best

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub https://github.com/Open-Systems-Pharmacology/InstallationValidator/issues/241#issuecomment-989056875, or unsubscribe https://github.com/notifications/unsubscribe-auth/AGDF72WVN4QKSOKHXFPIGWTUP6OJNANCNFSM5JM6NOTQ . Triage notifications on the go with GitHub Mobile for iOS https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675 or Android https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub.