Open cenotechnology opened 10 months ago
I should add that I have followed the instruction provided online: curl --proto '=https' --tlsv1.2 -sSf https://sh.rustup.rs | sh but the problem persists. Kind regards!
Could you run the code and paste the output here?
The code to run is reticulate::py_list_packages("textrpp_condaenv")
.
BTW, please also run the code sessionInfo()
and paste the output here.
Many thanks for your prompt response.
Here is the outcome for the first code: > reticulate::py_list_packages("textrpp_condaenv") package version requirement channel 1 ca-certificates 2023.11.17 ca-certificates=2023.11.17 conda-forge 2 libcxx 16.0.6 libcxx=16.0.6 conda-forge 3 libffi 3.3 libffi=3.3 conda-forge 4 libsqlite 3.44.2 libsqlite=3.44.2 conda-forge 5 libzlib 1.2.13 libzlib=1.2.13 conda-forge 6 ncurses 6.4 ncurses=6.4 conda-forge 7 openssl 1.1.1w openssl=1.1.1w conda-forge 8 pip 23.3.1 pip=23.3.1 conda-forge 9 python 3.9.0 python=3.9.0 conda-forge 10 readline 8.2 readline=8.2 conda-forge 11 setuptools 68.2.2 setuptools=68.2.2 conda-forge 12 sqlite 3.44.2 sqlite=3.44.2 conda-forge 13 tk 8.6.13 tk=8.6.13 conda-forge 14 tzdata 2023c tzdata=2023c conda-forge 15 wheel 0.42.0 wheel=0.42.0 conda-forge 16 xz 5.2.6 xz=5.2.6 conda-forge 17 zlib 1.2.13 zlib=1.2.13 conda-forge
Here is the outcomes of the second code:
`> sessionInfo() R version 4.3.2 (2023-10-31) Platform: aarch64-apple-darwin20 (64-bit) Running under: macOS Sonoma 14.1.1
Matrix products: default BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib LAPACK: /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib/libRlapack.dylib; LAPACK version 3.11.0
locale: [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
time zone: Europe/Berlin tzcode source: internal
attached base packages: [1] stats graphics grDevices utils datasets methods base
other attached packages: [1] reticulate_1.34.0 text_1.0
loaded via a namespace (and not attached):
[1] gtable_0.3.4 ggplot2_3.4.4 recipes_1.0.8 overlapping_2.1 lattice_0.22-5 vctrs_0.6.4
[7] tools_4.3.2 generics_0.1.3 parallel_4.3.2 tibble_3.2.1 fansi_1.0.5 pkgconfig_2.0.3
[13] Matrix_1.6-3 data.table_1.14.8 lhs_1.1.6 GPfit_1.0-8 lifecycle_1.0.4 compiler_4.3.2
[19] brio_1.1.3 munsell_0.5.0 codetools_0.2-19 DiceDesign_1.9 class_7.3-22 tune_1.1.2
[25] prodlim_2023.08.28 pillar_1.9.0 furrr_0.3.1 tidyr_1.3.0 MASS_7.3-60 gower_1.0.1
[31] yardstick_1.2.0 iterators_1.0.14 foreach_1.5.2 rpart_4.1.21 parallelly_1.36.0 lava_1.7.3
[37] dials_1.2.0 tidyselect_1.2.0 digest_0.6.33 stringi_1.8.2 future_1.33.0 dplyr_1.1.4
[43] purrr_1.0.2 listenv_0.9.0 splines_4.3.2 cowplot_1.1.1 parsnip_1.1.1 grid_4.3.2
[49] colorspace_2.1-0 cli_3.6.1 magrittr_2.0.3 survival_3.5-7 utf8_1.2.4 future.apply_1.11.0
[55] withr_2.5.2 scales_1.2.1 lubridate_1.9.3 timechange_0.2.0 globals_0.16.2 nnet_7.3-19
[61] timeDate_4022.108 png_0.1-8 workflows_1.1.3 testthat_3.2.0 hardhat_1.3.0 rsample_1.2.0
[67] rlang_1.1.2 Rcpp_1.0.11 glue_1.6.2 ipred_0.9-14 rstudioapi_0.15.0 jsonlite_1.8.7
[73] R6_2.5.1`
Once again, thanks for your help.
It seems your enviornment is correctly set. You do not need to run the curl command manually. The installation of the text package will automatically run that. So just try to reinstall the text package following the steps below.
reticulate::miniconda_path()
(should be similar to /Users/macID/Library/r-miniconda-arm64) in the Library folder (replace the macID with your mac user name).install.packages("devtools")
, and devtools::install_github("oscarkjell/text")
.Many thanks for your support. But the problem persists. Perhaps, it is a compatibility issue.
Have you installed any version of conda before installing the text package? Especially anaconda and miniconda. The incompatibility may be due to the incorrect path of the python package installer.
Thanks Moomoofarm1. I did not have any other version of anaconda or Miniconda on the laptop. I think it has to do with macOS. This morning, I tried to install it on a windows laptop, and it was successful. My macOS version is: 14.1.1 (23B81) (just for reference). Have a great day!
Nice to hear your success.
If the imcompatibility comes again, please paste the message printed by the code reticulate::py_last_error()
.
It might help.
Many thanks. I ran it, but got null as output.
'ERROR: Failed building wheel for tokenizers Failed to build tokenizers ERROR: Could not build wheels for tokenizers, which is required to install pyproject.toml-based projects Error: Error installing package(s): "'torch==2.0.0'", "'transformers==4.19.2'", "numpy", "pandas", "'nltk==3.6.7'", "scikit-learn", "'datasets==2.9.0'", "evaluate"
reticulate::py_last_error() NULL reticulate::py_last_error() NULL '
Maybe this helps by installing tokenizers directly.
reticulate::conda_install(envname="textrpp_condaenv", packages=c("tokenizers==0.13.1"), pip=TRUE)
Finally! many thanks, it works. But, I also had to install the packages "manually". I still had some issues when I tried to install transformers 4.19.2; then I changed it to 4.35.2, and it all worked out. The system has successfully initialised textrpp; and I successfully test textEmbed("hello")
.
Here are the packages that I have installed "manually":
reticulate::conda_install(envname="textrpp_condaenv", packages=c("tokenizers==0.13.1"), pip=TRUE) reticulate::conda_install(envname="textrpp_condaenv", packages=c("torch==2.0.0"), pip=TRUE) reticulate::conda_install(envname="textrpp_condaenv", packages=c("nltk==3.6.7"), pip=TRUE) reticulate::conda_install(envname="textrpp_condaenv", packages=c("datasets==2.9.0"), pip=TRUE) reticulate::conda_install(envname="textrpp_condaenv", packages=c("transformers==4.35.2"), pip=TRUE)
Once again many thanks for your support and patience!
I will update the code to automate the installation if necessary in the future.
FYI, I tried to install the package with my macbook with M2 processor with the normal procedure, same issue persisted. I tried the installation of the packages manually like mentioned by OP and this worked. Maybe this could be added to the advanced installation guide for Apple M1/M2 users?
Hi there, thanks for developing this program; I highly appreciate your contribution.
The installation interrupted and the system shows the following message:
`Building wheel for tokenizers (pyproject.toml): finished with status 'error' error: subprocess-exited-with-error
× Building wheel for tokenizers (pyproject.toml) did not run successfully. │ exit code: 1 ╰─> [616 lines of output] running bdist_wheel running build running build_py`
ERROR: Failed building wheel for tokenizers Failed to build tokenizers ERROR: Could not build wheels for tokenizers, which is required to install pyproject.toml-based projects Error: Error installing package(s): "'torch==2.0.0'", "'transformers==4.19.2'", "numpy", "pandas", "'nltk==3.6.7'", "scikit-learn", "'datasets==2.9.0'", "evaluate"
Many thanks for your support.