Feature calculation: Normalized difference (Diff) - Githubissues

OstfriesenBI / PredmiRNA

A set of scripts and tools to train a classifier for pre-miRNA Recognition

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Feature calculation: Normalized difference (Diff) #26

Closed mariusrueve closed 5 years ago

mariusrueve commented 5 years ago

Normalized difference (Diff)

Diff = |MFE - EFE|/L

MFE: Minimum free energy
EFE: Ensemble free energy
L: Sequence length

Input: csv file with the minimum free energy, ensemble free energy and the sequence length

"comment","mfe",efe","L"
"test","-17.12","-22.30","24"

Output: csv file with Diff

"comment","Diff"
"test","xxx"