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More chemokine related terms #44

Closed nataled closed 5 years ago

nataled commented 14 years ago

Entrez Gene ID Symbol Terms 390788 CCL3L2 chemokine (C-C motif) ligand 3-like 2 820 CAMP cathelicidin antimicrobial peptide 348249 CCL14-CCL15 chemokine ligand 14, chemokine ligand 15 transcription unit 1670 DEFA5 defensin, alpha 5, Paneth cell-specific 728045 PPBPL1 pro-platelet basic protein-like 1 6289 SAA2 serum amyloid A2

Reported by: ddougall

nataled commented 14 years ago

Not all requested terms are for actual proteins (they are annotated as pseudogenes or non-coding genes). These are indicated below, along with some new PRO terms and IDs (to go public with next release, but can be used immediately). If you have evidence that there are actual proteins for the ones skipped, please let us know.

> 390788 CCL3L2 chemokine (C-C motif) ligand 3-like 2

pseudogene, no protein entry.

> 820 CAMP cathelicidin antimicrobial peptide

[Term] id: PRO:000025851 name: cathelicidin antimicrobial peptide def: "A protein that is a translation product of the CAMP gene or a 1:1 ortholog thereof." [PRO:DAN] comment: Category=gene. synonym: "18 kDa cationic antimicrobial protein" EXACT [] synonym: "CAP-18" EXACT [] synonym: "hCAP-18" EXACT [] synonym: "CAP18" RELATED [] synonym: "FALL39" RELATED [] is_a: PRO:000000001 ! protein

> 348249 CCL14-CCL15 chemokine ligand 14, chemokine ligand 15 transcription unit

indicated as non-coding, no protein entry.

> 1670 DEFA5 defensin, alpha 5, Paneth cell-specific

[Term] id: PRO:000025852 name: defensin-5 def: "A protein that is a translation product of the DEFA5 gene or a 1:1 ortholog thereof." [PRO:DAN] comment: Category=gene. synonym: "defensin, alpha 5" EXACT [] synonym: "DEF5" RELATED [] synonym: "defensin, alpha 5, Paneth cell-specific" EXACT [] is_a: PRO:000000001 ! protein

> 728045 PPBPL1 pro-platelet basic protein-like 1

pseudogene, no protein entry.

> 6289 SAA2 serum amyloid A2

[Term] id: PRO:000025853 name: serum amyloid A protein def: "A protein that is a translation product of the SAA2 gene or a 1:1 ortholog thereof." [PRO:DAN] comment: Category=gene. synonym: "SAA" EXACT [] is_a: PRO:000000001 ! protein

Original comment by: nataled

nataled commented 14 years ago

Original comment by: nataled

nataled commented 14 years ago

This Tracker item was closed automatically by the system. It was previously set to a Pending status, and the original submitter did not respond within 14 days (the time period specified by the administrator of this Tracker).

Original comment by: sf-robot

nataled commented 14 years ago

Original comment by: sf-robot