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PennLINC
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aslprep
Preprocessing of arterial spin labeling (ASL) data
https://aslprep.readthedocs.io
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Start centralizing docstring entries
#318
tsalo
opened
1 year ago
0
Write out QC metadata
#317
tsalo
closed
1 year ago
0
Fix CombineMotionParameters to support single-volume volume types
#316
tsalo
closed
1 year ago
1
Remove M0 metadata from multi-PLD GE metadata dictionary
#315
tsalo
closed
1 year ago
1
Multi-PLD is not supported for GE data
#314
tsalo
closed
1 year ago
8
Add force-ge and force-no-ge parameters
#313
tsalo
closed
1 year ago
1
Fix the Docker image
#312
tsalo
closed
1 year ago
0
ASLPrep is not installed in Docker image after packaging refactor
#311
tsalo
closed
1 year ago
0
ASLPrep hangs when changing dseg datatype
#310
Luoyu-Wang
closed
1 year ago
29
Fix Docker build steps
#309
tsalo
closed
1 year ago
0
Docker build step fails
#308
tsalo
closed
1 year ago
0
Fix deployment config
#307
tsalo
closed
1 year ago
0
Add top-level sidecar file for PennLINC QC file
#306
tsalo
closed
1 year ago
0
Fix deployment configuration
#305
tsalo
closed
1 year ago
0
Update contributor lists
#304
tsalo
closed
1 year ago
1
Error with GE data
#303
tsalo
closed
1 year ago
18
Improve contributing and installation documentation
#302
tsalo
closed
1 year ago
0
Fix nibabel import
#301
tsalo
closed
1 year ago
5
AttributeError: module 'nibabel' has no attribute 'processing'
#300
Luoyu-Wang
closed
1 year ago
3
Replace niworkflows calls with dependency calls (second attempt)
#299
tsalo
closed
1 year ago
1
Replace weighted average with general kinetic model for multi-PLD data
#298
tsalo
opened
1 year ago
2
Get surface projection working
#297
tsalo
closed
12 months ago
1
Look into using SynthSeg for segmentation
#296
tsalo
closed
11 months ago
1
Use scan- or subject-wise hematocrit values, when available, to calculate T1blood
#295
tsalo
opened
1 year ago
0
Remove multi-echo elements
#294
tsalo
closed
1 year ago
0
Make it clear that BIDS datasets should already be scaled
#293
tsalo
closed
1 year ago
0
Document M0 scaling
#292
tsalo
closed
1 year ago
1
Raise warning if GE metadata does not match expected values from product sequence
#291
tsalo
opened
1 year ago
0
Adjust M0 to better match blood equilibrium magnetization
#290
tsalo
opened
1 year ago
0
Add example data and tutorial to documentation
#289
tsalo
opened
1 year ago
1
Allow preprocessing without T1w scan
#288
tsalo
opened
1 year ago
0
Investigate "surround" or "sinc" subtraction
#287
tsalo
opened
1 year ago
1
Improve plots
#286
tsalo
closed
1 year ago
1
Generate figures/report for the aggregated QC metrics from the combine-qc command
#285
tsalo
opened
1 year ago
2
Add histograms of CBF values by tissue type to report
#284
tsalo
closed
1 year ago
0
Use quantitative T1 map when available
#283
tsalo
opened
1 year ago
1
Reorganize atlases and add them to the package data
#282
tsalo
closed
1 year ago
0
Path error
#281
Jian-uon
closed
1 year ago
4
Shift PostLabelingDelay(s) by slice times
#280
tsalo
closed
1 year ago
2
Support runs with SCORE/SCRUB disabled
#279
tsalo
closed
1 year ago
0
SCORE/SCRUB disabled
#278
Jian-uon
closed
1 year ago
6
Improve CBF figure settings
#277
tsalo
closed
1 year ago
0
Fix RTD build
#276
tsalo
closed
1 year ago
0
Perform motion correction separately for each image type
#275
tsalo
closed
1 year ago
1
Remove test-made nifti files before storing artifacts
#274
tsalo
closed
1 year ago
0
Don't upload nifti artifacts to CircleCI
#273
tsalo
closed
1 year ago
0
Re-enable multi-PLD PASL support
#272
tsalo
opened
1 year ago
7
Remove unused workflows
#271
tsalo
closed
1 year ago
0
Refactor more
#270
tsalo
closed
1 year ago
1
Remove slice-timing correction
#269
tsalo
closed
1 year ago
0
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