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PeteHaitch / Lister2BAM

A collection of Python scripts to convert Lister-style alignment files from Lister et al. Nature (2009 and 2011) to BAM format.
MIT License
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Refactor scripts #2

Open PeteHaitch opened 10 years ago

PeteHaitch commented 10 years ago

Scripts do not add XM tag to each read. Scripts likely to be slow given I wrote these when I was just learning Python. Need to refactor/rewrite scripts to speed up and simplify conversion process and add in all necessary functionality.