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Planteome / amigo

This repo is the Planteome fork of geneontology.org AmiGO2 project. Issues in this repo should be reported only on AmiGO issues. Issues can be pushed upstream if relevant for GO.
BSD 3-Clause "New" or "Revised" License
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Display list of files loaded on Dev or Live #34

Closed cooperl09 closed 6 years ago

cooperl09 commented 6 years ago

It would be great if the page http://dev.planteome.org/amigo/load_details showed the actual list of files loaded without @elserj having to manually tweak it. This info is coming from a file in the web directory which is overridden by the catalog file.

Can you tweak the loading script to read the catalog file (https://github.com/Planteome/planteome-core) and display that info on the 'Load Details' page? Thanks

cmungall commented 6 years ago

not sure I understand. The list of ontologies loaded should match what is in the list of ontologies provided plus their import closure. No tweaking should be required

elserj commented 6 years ago

The golr_timestamp.log file only records the purl links, not the actual files that are grabbed via the catalog file. I have a script that does the loading and uses sed to replace these, but it currently is somewhat hard-coded. This issue is to generalize my script to use whatever the catalog file is actually loading.

elserj commented 6 years ago

Fixed loading script to use catalog file to replace links instead of hard coded ones.