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PoonLab / sierra-local

Retrieve HIVdb algorithm as XML and apply locally to HIV sequences
GNU General Public License v3.0
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User request: support AAVF or CodFreq input file formats #63

Open ArtPoon opened 3 years ago

ArtPoon commented 3 years ago

https://github.com/winhiv/aavf-spec https://hivdb.stanford.edu/page/codfreq/

ArtPoon commented 3 years ago

Looks like nucamino only accepts FASTA formatted input files, so for this to work we would have to write some conversion script.