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Project-MONAI / model-zoo

MONAI Model Zoo that hosts models in the MONAI Bundle format.
Apache License 2.0
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Update Bundles to use MONAI 1.0.1 and pytorch 1.13.0 #180

Closed yiheng-wang-nv closed 2 years ago

yiheng-wang-nv commented 2 years ago

The following bundles need to be updated into using MONAI 1.0.1 and Pytorch 1.13.0: brats_mri_segmentation @yiheng-wang-nv lung_nodule_ct_detection @Can-Zhao pancreas_ct_dints_segmentation @dongyang0122 pathology_tumor_detection @drbeh spleen_ct_segmentation @yiheng-wang-nv (cannot find yufan's account, I already checked it) spleen_deepedit_annotation @diazandr3s swin_unetr_btcv_segmentation @tangy5 endoscopic_inbody_classification and endoscopic_tool_segmentation @binliunls

May need your help to check if monai==1.0.1 and torch==1.13.0 work on your bundle, if it works, I can help to update the bundle directly, and if some other places (such as transforms) also need to be changed, may need your help to submit a PR. Thanks!

tangy5 commented 2 years ago

Hi @yiheng-wang-nv , let me use this issue for the changes so that we won't bother too many tickets. Swin Unetr bundle should be good with monai 1.0.1 and pytorch 1.13.0. Some updates here: https://github.com/Project-MONAI/model-zoo/pull/182 Thanks.

binliunls commented 2 years ago

Hi @yiheng-wang-nv , I have run endoscopic_inbody_classification and endoscopic_tool_segmentation bundles. They work fine with monai 1.0.1 and pytorch 1.13.0. Thanks, Bin