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Przemol / seqplots

:chart_with_upwards_trend:SeqPlots - An interactive tool for visualizing NGS signals and sequence motif densities along genomic features using average plots and heatmaps.
http://przemol.github.io/seqplots
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Seqplot error #27

Closed amitpande74 closed 6 years ago

amitpande74 commented 7 years ago

Hi, I have Ubuntu 14.04 and installed Seqplots according to the instructions mentioned here: https://github.com/Przemol/seqplots_electron/releases/tag/v3.0.11. When I run the file it stops after loading and nothing happens. The developer tools sections shows this error: stderr: /tmp/.mount_59BLjw/usr/bin/resources/app/Rlinux/lib64/R/bin/exec/R: error while loading shared libraries: libicuuc.so.55: cannot open shared object file: No such file or directory There are no libraries by that name for ubuntu 14.04. Kindly help.

Przemol commented 6 years ago

Ubuntu 14.04 is not supported, only Ubuntu 16.04 LTS. You can install R (https://www.r-project.org/) and from R run following code:

source("http://bioconductor.org/biocLite.R")
biocLite("seqplots")

if (!require("devtools")) install.packages("devtools")
devtools::install_github('przemol/seqplots', build_vignettes=FALSE)

library(seqplots)
run()

This method gives you the same functionality as stand-alone app and work across all Linux distributions.