Pymol-Scripts Pymol-script-repo issues

Pymol-Scripts / Pymol-script-repo

Collected scripts for Pymol

http://www.pymolwiki.org/index.php/Git_intro

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issues

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Fix support for multiple objects selection

#150 jrom99 closed 2 weeks ago
7
'string.split()' causes issue in 'Pymol-script-repo/modules/ADT/MolKit /pdbParser.py'

#149 WeibinRen opened 3 weeks ago
4
findseq has wrong selection behavior for multiple chain objects

#148 jrom99 closed 2 weeks ago
11
Plugins needing refactor

#147 pslacerda opened 2 months ago
0
List plugins documentations

#146 pslacerda closed 2 weeks ago
3
Independent color and as_putty options for color_by_conservation.py

#145 pslacerda closed 2 months ago
5
Independent color option for color_by_conservation.py

#144 pslacerda closed 2 months ago
0
tmalign update

#143 nemethzb closed 2 months ago
1
Compiled documentation

#142 pslacerda closed 2 months ago
0
Add output message for findseq + don't create empty selection when seq was not found

#141 jrom99 closed 2 months ago
0
Add tab-completion to findseq

#140 jrom99 closed 5 months ago
0
Port dynoplot to PyQt

#139 speleo3 closed 5 months ago
0
Script to convert current visual ligand-protein complex to python code

#138 rez3vil closed 2 months ago
1
Why Can't I Mutate The Specific Amino?

#137 JonasLi-19 closed 2 months ago
1
Python 3.10 disallows float to int implicit conversions

#136 JarrettSJohnson opened 1 year ago
0
fix (#118) and (#130)

#135 wadx2019 closed 5 months ago
4
Add outline.py

#134 JarrettSJohnson closed 1 year ago
1
Testing scripts & plugins

#133 JarrettSJohnson opened 1 year ago
4
add findSurfaceResiduesListCharged.py

#132 JarrettSJohnson closed 1 year ago
2
Update findseq.py

#131 hongjunbai closed 1 year ago
1
OSError Running Autodock Plugin

#130 lalithroopesh closed 5 months ago
3
Update tmalign.py for python 3.11

#129 danpf closed 1 year ago
1
dssp_stride plugin: Find binaries with shutil.which()

#128 speleo3 closed 1 year ago
0
Python 3 fix: autodock_plugin list sorting

#127 speleo3 closed 1 year ago
0
Is there an api implementation like cmd.movie_fade()?

#126 mce13 closed 2 months ago
1
Cyspka- "error empty selection"

#125 JackSuitor closed 5 months ago
3
Prevent malformed issue when using PDB without defined chain names.

#124 tcoates5 closed 2 years ago
2
Findseq breaks on proteins without named chains.

#123 tcoates5 closed 5 months ago
1
Error running plugin Autodock plugin

#122 houdini69 closed 5 months ago
1
Fixed issue of floats that were causing errors

#121 sfhbarnett closed 2 years ago
1
syntax for creating sidechain pseudoatoms for selected residues

#120 goji-patai closed 5 months ago
2
FindSurfaceSequence not detecting residues with insertion codes

#119 Mark-a-Lis opened 3 years ago
0
AutoDock Vina missing from the plugin interface

#118 Yuhang-CADD closed 5 months ago
0
Optimize: Read MOL strings instead of PDB strings

#117 Polo-Zecc closed 3 years ago
1
Optimize works poorly on small molecules - have been able to fix

#116 Polo-Zecc closed 1 year ago
5
dssp plugin

#115 biotech70 closed 5 months ago
6
PyTM plugin clashes

#114 seemadri opened 3 years ago
0
create annotate_v.py

#112 xinyu-dev closed 4 years ago
1
elbow_angle: fix #108

#111 jaredsampson closed 4 years ago
0
AutoDock Plugin Wouldn't Work Under Python3

#110 Aster-the-Med-Stu closed 1 year ago
7
elbow_angle: catch cmd.get_atom_coords() CmdException when no atom exists

#109 jaredsampson closed 4 years ago
0
elbow_angle.py: Fails silently when given `limit` residue doesn't exist.

#108 jaredsampson closed 4 years ago
6
Graphical interface for AutoDock Vina

#107 pslacerda closed 2 years ago
2
Fix Views plugin

#106 pslacerda closed 4 years ago
0
Graphical interface for get_view and set_view

#105 pslacerda closed 4 years ago
1
Add Geo-measures plugin v.0.7

#104 lkagami closed 4 years ago
9
UnicodeDecodeError: 'gbk' codec can't decode byte 0xa8 in position 165: illegal multibyte sequence

#103 pkuljx closed 5 years ago
5
New PyMOL command for creating publication quality images about receptor-ligand interactions.

#102 tevang closed 5 years ago
0
python3 version

#101 dkoes closed 5 years ago
1
Port "show_contacts.py" to Python 3

#100 speleo3 closed 5 years ago
0