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RTXteam
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RTX-KG2
Build system for the RTX-KG2 biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)
MIT License
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Is it time to upgrade the KG2pre build system to Ubuntu 22.04?
#262
saramsey
closed
1 year ago
9
Update link to live instance
#261
dkoslicki
closed
1 year ago
0
Check if we have any SemMedDB edges without PubMed cross-references
#258
saramsey
closed
1 year ago
5
Protein returned as a chemical
#256
cbizon
opened
1 year ago
3
Unexpected use of qualifiers
#255
cbizon
opened
1 year ago
1
Error in `Rule Validation`:
#254
acevedol
closed
1 year ago
0
Biolink 3.1.2 Compliance
#253
acevedol
closed
1 year ago
2
Build KG2.8.1
#252
acevedol
closed
1 year ago
4
KEGG node missing name in KG2.8.0
#251
amykglen
closed
1 year ago
3
KG2.8.0 edges with a qualified_object_direction, but no qualified_predicate
#250
amykglen
closed
1 year ago
5
KGX Validation complaints
#249
acevedol
opened
1 year ago
0
KGX dump of KG2.8.0pre for team Unsecret Agent
#248
saramsey
closed
1 year ago
1
KGE seems to be semi-deprecated
#247
saramsey
closed
1 year ago
1
Change type of qualifiers
#246
acevedol
closed
1 year ago
0
FYI: MolePro download links
#245
saramsey
opened
1 year ago
0
Error on TSV:
#244
acevedol
closed
1 year ago
2
Error in Rule Slim
#243
acevedol
closed
1 year ago
2
Error in rule Simplify
#242
acevedol
closed
1 year ago
3
Script for validating owl files
#241
acevedol
opened
1 year ago
0
Error in rule Stats:
#240
acevedol
closed
1 year ago
3
Error in multi ont
#239
acevedol
closed
1 year ago
4
Error in rule Reactome_Conversion
#238
acevedol
closed
2 years ago
2
Error in rule DrugCentral_Conversion
#237
acevedol
closed
2 years ago
2
Error in rule Ontologies_and_TTL
#236
acevedol
closed
1 year ago
4
Error in rule DGIdb_Conversion:
#235
acevedol
closed
2 years ago
0
Error in `rule DrugCentral_Conversion`
#234
acevedol
closed
2 years ago
1
Error with NCBI Gene Conversion
#233
acevedol
closed
2 years ago
1
Error in `rule UMLS`
#232
acevedol
closed
1 year ago
7
Error in `rule DrugCentral`
#231
acevedol
closed
2 years ago
2
Error in `rule KEGG`
#230
acevedol
closed
1 year ago
9
Error in `Rule ValidationTests`
#229
acevedol
closed
2 years ago
7
Error with click requirement
#228
acevedol
closed
2 years ago
0
Error in setup requirements SPARQLWrapper
#227
acevedol
closed
2 years ago
0
Build KG2.8.0pre - Biolink 3.0
#226
acevedol
closed
1 year ago
10
Test data with qualifiers
#225
acevedol
opened
2 years ago
1
CHEMBL nodes - categories value and attribute "biolink:category" don't agree on some nodes - attribute value missing on others
#224
Genomewide
opened
2 years ago
1
Glucose returned as a gene.
#223
cbizon
opened
2 years ago
5
Unused predicates in 2.7.6 build
#222
acevedol
closed
1 year ago
0
Biolink 3.0 Compliance
#221
acevedol
closed
1 year ago
7
Update sources for KG2.7.7
#220
acevedol
closed
1 year ago
6
SRI Node normalizer JSON-lines file
#219
saramsey
opened
2 years ago
4
Testing triples file
#218
acevedol
opened
2 years ago
0
Specificity Index
#217
acevedol
opened
2 years ago
3
Get Rid of Automatic Version Update
#216
acevedol
closed
1 year ago
2
Validation of allowed categories for a given predicate?
#215
amykglen
opened
2 years ago
0
Edge merging
#213
acevedol
opened
2 years ago
0
liver diseases subtypes of liver? Chemical returned as phenotype
#212
cbizon
opened
2 years ago
2
Edges.tsv too large for upload to Git LFS
#211
acevedol
closed
2 years ago
2
KEGG disease nodes are categorized as Pathways
#210
amykglen
opened
2 years ago
7
Ambiguity in TSV naming
#209
acevedol
opened
2 years ago
0
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