Since i need to predict thousands of proteins, but the scripts (run_e2e_ver.sh and run_pyrosetta_ver.sh) seem to only input one protein at the same time. What should i do to speedup my analysis?
Currently, i use the for loop to run pyrosetta for each protein, any suggustion?
Hi @Rusfell, I've modified a branch with different jobId which is suitable for HPC running enviroment. You can refer to this step by step guide to build a HPC cluster for proteins folding.
Hope it can help.
Hi, RoseTTAFold team~
Since i need to predict thousands of proteins, but the scripts (run_e2e_ver.sh and run_pyrosetta_ver.sh) seem to only input one protein at the same time. What should i do to speedup my analysis?
Currently, i use the
for
loop to run pyrosetta for each protein, any suggustion?Thanks!
Rusfell