Roth-Lab / pyclone-vi

Fast method for inferring cancer clonal population structure from SNV data.
GNU General Public License v3.0
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too less clones in results #34

Open songmingl opened 1 year ago

songmingl commented 1 year ago

Hi, I'm using PyClone-Vi on my WES data. There are multiple samples from different patients and the mutation numbers range from hundreds to thousands. The PyClone-Vi predicted max to 4 clones, is there any parameter to increase the clone number?

In some samples, the sum of the CCF of clones is lower than 1. Theoretically, This sum should be >= 1, right?