Closed I-Bouros closed 1 year ago
[x] Write down mathematically the log-likelihoods for Poisson and negative binomial noise branching processes
[x] Create a Pints.LogPDF class for the Poisson Log-likelihood
[x] Create a Pints.LogPDF class for the negative binomial Log-likelihood with 2 different methods:
Use evaluateS1 method from Pints for all these classes! Sliding window length is a fixed parameter on the class which needs to be set!
We split this into two PRs, 1 for Poisson and 1 for negative binomial.
Compare new Poisson methods to previous one in branching processes
[x] Write down mathematically the log-likelihoods for Poisson and negative binomial noise branching processes
[x] Create a Pints.LogPDF class for the Poisson Log-likelihood
[x] Create a Pints.LogPDF class for the negative binomial Log-likelihood with 2 different methods:
Use evaluateS1 method from Pints for all these classes! Sliding window length is a fixed parameter on the class which needs to be set!