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SSCHAcode / CellConstructor

A python utilities to handle with atomic structures and interfacing with common formats (xyz and quantum-espresso).
GNU General Public License v3.0
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"fortranobject.o：file or directory not found " error #39

Closed JLU-ICCMS-MaYuan closed 1 year ago

JLU-ICCMS-MaYuan commented 2 years ago

when I use python setup.py install to install CellConstructor, I met such an error below:

gfortran: error：build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9/fortranobject.o：file or directory not found occur.

mesonepigreco commented 2 years ago

This is quite strange, try to remove the build directory and install again, then post here the full output, please, so we can figure out what is happening.

rm -r build python setup.py install

P.S. Sorry for the late reply

JLU-ICCMS-MaYuan commented 1 year ago

Thanks, the problem has been resolved. I find the key is the version of numpy. when I set the version of 1.21, it worked.

here is the full output. /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/distutils/dist.py:274: UserWarning: Unknown distribution option: 'setup_requires' warnings.warn(msg) /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/distutils/dist.py:274: UserWarning: Unknown distribution option: 'include_package_data' warnings.warn(msg) running build running config_cc INFO: unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc INFO: unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src INFO: build_src INFO: building extension "symph" sources INFO: f2py options: [] INFO: f2py:> build/src.linux-x86_64-3.9/symphmodule.c creating build creating build/src.linux-x86_64-3.9 updatevars: "character s0name(64)45" is mapped to "character s0name(64,45)" rmbadname1: Replacing "stdout" with "stdout_bn". rmbadname1: Replacing "stdout" with "stdout_bn". rmbadname1: Replacing "stdout" with "stdout_bn". rmbadname1: Replacing "stdout" with "stdout_bn". rmbadname1: Replacing "index" with "index_bn". analyzevars: charselector={'len': '45'} unhandled. sortvarnames: failed to compute dependencies because of cyclic dependencies between nat, q, tau, tau_sc, itau, dyn, nq get_useparameters: mapping for {'only': 1, 'map': {'dp': 'dp'}} not impl. get_useparameters: mapping for {'only': 1, 'map': {'dp': 'dp'}} not impl. Reading fortran codes... Reading file 'FModules/symdynph_gq_new.f90' (format:free) Reading file 'FModules/symm_base.f90' (format:free) Reading file 'FModules/sgam_ph.f90' (format:free) Reading file 'FModules/invmat.f90' (format:free) Reading file 'FModules/set_asr.f90' (format:free) Reading file 'FModules/error_handler.f90' (format:free) Reading file 'FModules/io_global.f90' (format:free) Reading file 'FModules/flush_unit.f90' (format:free) Reading file 'FModules/symvector.f90' (format:free) Reading file 'FModules/fc_supercell_from_dyn.f90' (format:free) Reading file 'FModules/set_tau.f90' (format:free) Reading file 'FModules/cryst_to_car.f90' (format:free) Reading file 'FModules/recips.f90' (format:free) Reading file 'FModules/q2qstar_out.f90' (format:free) Reading file 'FModules/rotate_and_add_dyn.f90' (format:free) Reading file 'FModules/trntnsc.f90' (format:free) Reading file 'FModules/star_q.f90' (format:free) Reading file 'FModules/eqvect.f90' (format:free) Reading file 'FModules/symm_matrix.f90' (format:free) Reading file 'FModules/from_matdyn.f90' (format:free) Reading file 'FModules/interp.f90' (format:free) Reading file 'FModules/q_gen.f90' (format:free) Reading file 'FModules/smallgq.f90' (format:free) Reading file 'FModules/symmetry_high_rank.f90' (format:free) Reading file 'FModules/unwrap_tensors.f90' (format:free) Reading file 'FModules/get_latvec.f90' (format:free) Reading file 'FModules/contract_two_phonon_propagator.f90' (format:free) Reading file 'FModules/get_q_grid_fast.f90' (format:free) Reading file 'FModules/kind.f90' (format:free) Reading file 'FModules/constants.f90' (format:free) Reading file 'FModules/eff_charge_interp.f90' (format:free) Reading file 'FModules/get_translations.f90' (format:free) Reading file 'FModules/get_equivalent_atoms.f90' (format:free) Post-processing... Block: symph Block: symdynph_gq_new Block: symm_base In: :symph:FModules/symm_base.f90:symm_base get_parameters: got "invalid syntax (, line 1)" on '1.0d-6' In: :symph:FModules/symm_base.f90:symm_base get_parameters: got "invalid syntax (, line 1)" on '1.0d-5' Block: set_accep_threshold Block: get_accep_threshold Block: set_at_bg Block: inverse_s Block: set_sym_bl In: :symph:FModules/symm_base.f90:symm_base:set_sym_bl get_parameters: got "unexpected EOF while parsing (, line 1)" on '0.866025403784438597d0' In: :symph:FModules/symm_base.f90:symm_base:set_sym_bl get_parameters: got "unexpected EOF while parsing (, line 1)" on '0.5d0' In: :symph:FModules/symm_base.f90:symm_base:set_sym_bl get_parameters: got "unexpected EOF while parsing (, line 1)" on '-0.866025403784438597d0' In: :symph:FModules/symm_base.f90:symm_base:set_sym_bl get_parameters: got "unexpected EOF while parsing (, line 1)" on '-0.5d0' Block: find_sym Block: sgam_at Block: sgam_at_mag Block: set_sym Block: copy_sym Block: is_group Block: eqvect Block: checksym Block: checkallsym Block: s_axis_to_cart Block: smallg_q Block: sgam_ph_new Block: invmat Block: set_asr Block: sp_zeu Block: sp1 Block: sp2 Block: sp3 Block: errore Block: infomsg In: :symph:FModules/error_handler.f90:infomsg get_useparameters: no module io_global info used by infomsg Block: io_global Block: io_global_start Block: meta_io_global_start Block: io_global_getionode Block: io_global_getmeta Block: flush_unit Block: symvector Block: fc_supercell_from_dyn Block: fast_ft_real_space_from_dynq Block: impose_trans_sc In: :symph:FModules/fc_supercell_from_dyn.f90:impose_trans_sc get_parameters: got "invalid syntax (, line 1)" on '1d-6' Block: dyn_from_fc Block: set_tau Block: cryst_to_cart Block: recips Block: q2qstar_out Block: rotate_and_add_dyn Block: trntnsc Block: star_q Block: eqvect In: :symph:FModules/eqvect.f90:eqvect get_parameters: got "invalid syntax (, line 1)" on '1.0d-4' Block: symmatrix Block: cart_to_crys_mat Block: crys_to_cart_mat Block: frc_blk Block: wsinit Block: wsweight Block: get_frc Block: asign_supercell_index_new Block: q_gen In: :symph:FModules/q_gen.f90:q_gen get_parameters: got "invalid syntax (, line 1)" on '1.0d-7' Block: set_irotmq In: :symph:FModules/smallgq.f90:set_irotmq get_parameters: got "invalid syntax (, line 1)" on '1.d-5' Block: get_tau_sc_latvec Block: permute_v3 Block: permute_v4 Block: trans_v2 Block: trans_v3 Block: trans_v4 Block: sym_v2 Block: sym_v3 Block: sym_v4 Block: print_symm Block: threetosix_real Block: sixtothree_real Block: get_latvec Block: contract_two_ph_propagator Block: get_two_phonon_propagator In: :symph:FModules/contract_two_phonon_propagator.f90:get_two_phonon_propagator get_parameters: got "invalid syntax (, line 1)" on '6.336857346553283d-06' In: :symph:FModules/contract_two_phonon_propagator.f90:get_two_phonon_propagator get_parameters: got "invalid syntax (, line 1)" on '1d-6' In: :symph:FModules/contract_two_phonon_propagator.f90:get_two_phonon_propagator get_parameters[TODO]: implement evaluation of complex expression (0d0, 1d0) In: :symph:FModules/contract_two_phonon_propagator.f90:get_two_phonon_propagator get_parameters: got "invalid syntax (, line 1)" on '(0d0, 1d0)' Block: get_q_grid Block: kinds Block: print_kind_info Block: constants In: :symph:FModules/constants.f90:constants get_parameters: got "invalid syntax (, line 1)" on '6.02214129d+23' In: :symph:FModules/constants.f90:constants get_parameters: got "name 'kboltzmann' is not defined" on 'kboltzmann/hartree' In: :symph:FModules/constants.f90:constants get_parameters: got "name 'kboltzmann' is not defined" on 'kboltzmann/rydberg' In: :symph:FModules/constants.f90:constants get_parameters: got "name 'hartree' is not defined" on 'hartree/electronvolt' In: :symph:FModules/constants.f90:constants get_parameters: got "unsupported operand type(s) for /: 'str' and 'float'" on 'autoev/2.0' In: :symph:FModules/constants.f90:constants get_parameters: got "name 'amu' is not defined" on 'amu/electronmass' In: :symph:FModules/constants.f90:constants get_parameters: got "unsupported operand type(s) for /: 'str' and 'float'" on 'amu_au/2.0' In: :symph:FModules/constants.f90:constants get_parameters: got "name 'hplanck' is not defined" on 'hplanck/tpi/hartree' In: :symph:FModules/constants.f90:constants get_parameters: got "can't multiply sequence by non-int of type 'float'" on 'au_sec1.0e+12' In: :symph:FModules/constants.f90:constants get_parameters: got "name 'electron' is not defined" on 'electronbohrradius/debye' In: :symph:FModules/constants.f90:constants get_parameters: got "name 'electronvolt' is not defined" on 'electronvolt/kboltzmann' In: :symph:FModules/constants.f90:constants get_parameters: got "name 'rydberg' is not defined" on 'rydberg/kboltzmann' In: :symph:FModules/constants.f90:constants get_parameters: got "name 'csi' is not defined" on 'csi/bohrradiussiau' In: :symph:FModules/constants.f90:constants get_parameters: got "name 'au' is not defined" on 'au' In: :symph:FModules/constants.f90:constants get_parameters: got "name 'au' is not defined" on 'au' In: :symph:FModules/constants.f90:constants get_parameters: got "unsupported operand type(s) for /: 'float' and 'str'" on '1.0/au_terahertz/fpi' In: :symph:FModules/constants.f90:constants get_parameters: got "can't multiply sequence by non-int of type 'float'" on 'ry_to_thz1000.0' In: :symph:FModules/constants.f90:constants get_parameters: got "can't multiply sequence by non-int of type 'float'" on '1.e+10ry_to_thz/c_si' Block: rgd_blk In: :symph:FModules/eff_charge_interp.f90:rgd_blk get_parameters: got "name 'hartreesi' is not defined" on 'hartreesi/2.0' In: :symph:FModules/eff_charge_interp.f90:rgd_blk get_parameters: got "invalid syntax (, line 1)" on '1.0ep/(munoughtsic' In: :symph:FModules/eff_charge_interp.f90:rgd_blk get_parameters: got "name 'amuau' is not defined" on 'amuau/2.0' get_useparameters: mapping for {'only': 1, 'map': {'pi': 'pi', 'tpi': 'tpi', 'fpi': 'fpi', 'e2': 'e2'}} not impl. get_useparameters: mapping for {'only': 1, 'map': {'dp': 'dp'}} not impl. get_useparameters: mapping for {'only': 1, 'map': {'pi': 'pi', 'fpi': 'fpi', 'e2': 'e2'}} not impl. get_useparameters: mapping for {'only': 1, 'map': {'dp': 'dp'}} not impl. In: :symph:FModules/eff_charge_interp.f90:rgd_blk get_parameters: got "name 'ausec' is not defined" on 'ausec1.0e+12' In: :symph:FModules/eff_charge_interp.f90:rgd_blk get_parameters: got "name 'hartreesi' is not defined" on 'hartreesi/bohrradiussi3/1.0e+9' In: :symph:FModules/eff_charge_interp.f90:rgd_blk get_parameters: got "name 'augpa' is not defined" on '10.0augpa/2.0' In: :symph:FModules/eff_charge_interp.f90:rgd_blk get_parameters: got "invalid syntax (, line 1)" on '1e+9ephplanckc/electronvolt' In: :symph:FModules/eff_charge_interp.f90:rgd_blk get_parameters: got "invalid syntax (, line 1)" on '1e+9ephplanckc/rydberg' In: :symph:FModules/eff_charge_interp.f90:rgd_blk get_parameters: got "name 'csi' is not defined" on 'csi/bohrradiussiau' In: :symph:FModules/eff_charge_interp.f90:rgd_blk get_parameters: got "name 'bohrradiussi' is not defined" on 'bohrradiussi100.0' In: :symph:FModules/eff_charge_interp.f90:rgd_blk get_parameters: got "name 'bohrradiuscm' is not defined" on 'bohrradiuscm1.0e8' In: :symph:FModules/eff_charge_interp.f90:rgd_blk get_parameters: got "invalid syntax (, line 1)" on '1.0ep/bohrradius' In: :symph:FModules/eff_charge_interp.f90:rgd_blk get_parameters: got "EOL while scanning string literal (, line 1)" on "'au" In: :symph:FModules/eff_charge_interp.f90:rgd_blk get_parameters: got "invalid syntax (, line 1)" on '1.0ep/au' In: :symph:FModules/eff_charge_interp.f90:rgd_blk get_parameters: got "name 'rytothz' is not defined" on 'rytothz1000.0' In: :symph:FModules/eff_charge_interp.f90:rgd_blk get_parameters: got "invalid syntax (, line 1)" on '1.e+10eprytothz/c' Block: nonanal In: :symph:FModules/eff_charge_interp.f90:nonanal get_parameters: got "name 'hartreesi' is not defined" on 'hartreesi/2.0' In: :symph:FModules/eff_charge_interp.f90:nonanal get_parameters: got "invalid syntax (, line 1)" on '1.0ep/(munoughtsic' In: :symph:FModules/eff_charge_interp.f90:nonanal get_parameters: got "name 'amuau' is not defined" on 'amuau/2.0' In: :symph:FModules/eff_charge_interp.f90:nonanal get_parameters: got "name 'ausec' is not defined" on 'ausec1.0e+12' In: :symph:FModules/eff_charge_interp.f90:nonanal get_parameters: got "name 'hartreesi' is not defined" on 'hartreesi/bohrradiussi3/1.0e+9' In: :symph:FModules/eff_charge_interp.f90:nonanal get_parameters: got "name 'augpa' is not defined" on '10.0augpa/2.0' In: :symph:FModules/eff_charge_interp.f90:nonanal get_parameters: got "invalid syntax (, line 1)" on '1e+9ephplanckc/electronvolt' In: :symph:FModules/eff_charge_interp.f90:nonanal get_parameters: got "invalid syntax (, line 1)" on '1e+9ephplanckc/rydberg' In: :symph:FModules/eff_charge_interp.f90:nonanal get_parameters: got "name 'csi' is not defined" on 'csi/bohrradiussiau' In: :symph:FModules/eff_charge_interp.f90:nonanal get_parameters: got "name 'bohrradiussi' is not defined" on 'bohrradiussi100.0' In: :symph:FModules/eff_charge_interp.f90:nonanal get_parameters: got "name 'bohrradiuscm' is not defined" on 'bohrradiuscm1.0e8' In: :symph:FModules/eff_charge_interp.f90:nonanal get_parameters: got "invalid syntax (, line 1)" on '1.0ep/bohrradius' In: :symph:FModules/eff_charge_interp.f90:nonanal get_parameters: got "EOL while scanning string literal (, line 1)" on "'au" In: :symph:FModules/eff_charge_interp.f90:nonanal get_parameters: got "invalid syntax (, line 1)" on '1.0ep/au' In: :symph:FModules/eff_charge_interp.f90:nonanal get_parameters: got "name 'rytothz' is not defined" on 'rytothz1000.0' In: :symph:FModules/eff_charge_interp.f90:nonanal get_parameters: got "invalid syntax (, line 1)" on '1.e+10eprytothz/c' Block: trasl Block: get_translations Block: get_equivalent_atoms Block: get_closest_vector Block: get_gr_data In: :symph:FModules/get_equivalent_atoms.f90:get_gr_data get_parameters: got "unexpected EOF while parsing (, line 1)" on '3.141592653589793d0' Block: fix_coords_in_unit_cell Block: matinv3 Post-processing (stage 2)... Block: symph Block: unknown_interface Block: symdynph_gq_new Block: symm_base Block: set_accep_threshold Block: get_accep_threshold Block: set_at_bg Block: inverse_s Block: set_sym_bl Block: find_sym Block: sgam_at Block: sgam_at_mag Block: set_sym Block: copy_sym Block: is_group Block: eqvect Block: checksym Block: checkallsym Block: s_axis_to_cart Block: smallg_q Block: sgam_ph_new Block: invmat Block: set_asr Block: sp_zeu Block: sp1 Block: sp2 Block: sp3 Block: errore Block: infomsg Block: io_global Block: io_global_start Block: meta_io_global_start Block: io_global_getionode Block: io_global_getmeta Block: flush_unit Block: symvector Block: fc_supercell_from_dyn Block: fast_ft_real_space_from_dynq Block: impose_trans_sc Block: dyn_from_fc Block: set_tau Block: cryst_to_cart Block: recips Block: q2qstar_out Block: rotate_and_add_dyn Block: trntnsc Block: star_q Block: eqvect Block: symmatrix Block: cart_to_crys_mat Block: crys_to_cart_mat Block: frc_blk Block: wsinit Block: wsweight Block: get_frc Block: asign_supercell_index_new Block: q_gen Block: set_irotmq Block: get_tau_sc_latvec Block: permute_v3 Block: permute_v4 Block: trans_v2 Block: trans_v3 Block: trans_v4 Block: sym_v2 Block: sym_v3 Block: sym_v4 Block: print_symm Block: threetosix_real Block: sixtothree_real Block: get_latvec Block: contract_two_ph_propagator Block: get_two_phonon_propagator Block: get_q_grid Block: kinds Block: print_kind_info Block: constants Block: rgd_blk Block: nonanal Block: trasl Block: get_translations Block: get_equivalent_atoms Block: get_closest_vector Block: get_gr_data Block: fix_coords_in_unit_cell Block: matinv3 Building modules... Building module "symph"... Constructing wrapper function "symdynph_gq_new"... symdynph_gq_new(xq,phi,s,invs,rtau,irt,irotmq,minus_q,nsymq,[nat]) Constructing wrapper function "sgam_ph_new"... rtau = sgam_ph_new(at,bg,nsym,s,irt,tau,[nat]) Constructing wrapper function "invmat"... a_inv = invmat(a,[n]) Constructing wrapper function "set_asr"... set_asr(asr,axis,tau,dyn,zeu,[nat]) Constructing wrapper function "sp_zeu"... sp_zeu(zeu_u,zeu_v,scal,[nat]) Constructing wrapper function "sp1"... sp1(u,v,scal,[nat]) Constructing wrapper function "sp2"... sp2(u,v,ind_v,scal,[nat]) Constructing wrapper function "sp3"... sp3(u,v,i,na,scal,[nat]) Constructing wrapper function "errore"... errore(calling_routine,message,ierr) Constructing wrapper function "infomsg"... infomsg(routine,message) Constructing wrapper function "flush_unit"... flush_unit(unit_tobeflushed) Constructing wrapper function "symvector"... symvector(nsym,irt,s,at,bg,vect,[nat]) Constructing wrapper function "fc_supercell_from_dyn"... phitot_sc = fc_supercell_from_dyn(phitot,q,tau,tau_sc,itau,[nat,nq]) Constructing wrapper function "fast_ft_real_space_from_dynq"... fc_supercell = fast_ft_real_space_from_dynq(unit_cell_coords,super_cell_coords,itau,q_tot,dynq,[nat,nat_sc,nq]) Constructing wrapper function "impose_trans_sc"... impose_trans_sc(fc_sc,tau_sc_cryst,itau,[nat_sc]) Constructing wrapper function "dyn_from_fc"... dyn = dyn_from_fc(phitot_sc,q,tau,tau_sc,itau,[nq,nat]) Constructing wrapper function "set_tau"... set_tau(at,at_blk,tau,tau_blk,ityp,ityp_blk,itau_blk,[nat,nat_blk]) Constructing wrapper function "cryst_to_cart"... cryst_to_cart(vec,trmat,iflag,[nvec]) Constructing wrapper function "recips"... b1,b2,b3 = recips(a1,a2,a3) Constructing wrapper function "q2qstar_out"... undo_rmbadname1: Replacing "stdout_bn" with "stdout". undo_rmbadname1: Replacing "stdout_bn" with "stdout". undo_rmbadname1: Replacing "stdout_bn" with "stdout". undo_rmbadname1: Replacing "stdout_bn" with "stdout". dynqstar = q2qstar_out(dyn,at,bg,nsym,s,invs,irt,rtau,nq,sxq,isq,imq,nqtot,[nat]) Constructing wrapper function "rotate_and_add_dyn"... phi2 = rotate_and_add_dyn(phi,isym,s,invs,irt,rtau,sxq,[nat]) Constructing wrapper function "trntnsc"... trntnsc(phi,at,bg,iflg) Constructing wrapper function "star_q"... nq,sxq,isq,imq = star_q(xq,at,bg,nsym,s,invs,verbosity) Creating wrapper for Fortran function "eqvect"("eqvect")... Constructing wrapper function "eqvect"... eqvect = eqvect(x,y,f) Constructing wrapper function "symmatrix"... symmatrix(matr,s,nsym,at,bg) Constructing wrapper function "cart_to_crys_mat"... cart_to_crys_mat(matr,at) Constructing wrapper function "crys_to_cart_mat"... crys_to_cart_mat(matr,bg) Constructing wrapper function "frc_blk"... dyn = frc_blk(q,tau,frc,at,rws,nrws,[nat,nr1,nr2,nr3,nrwsx]) Constructing wrapper function "wsinit"... nrws = wsinit(rws,atw,[nrwsx]) Creating wrapper for Fortran function "wsweight"("wsweight")... Constructing wrapper function "wsweight"... wsweight = wsweight(r,rws,nrws,[nrwsx]) Constructing wrapper function "get_frc"... frc = get_frc(phi_sc,tau,tau_sc,at,itau,size1,size2,size3,[nat,natsc]) Constructing wrapper function "asign_supercell_index_new"... l,m,n = asign_supercell_index_new(vect,at) Constructing wrapper function "q_gen"... qbid = q_gen(nsc,at_blk,bg_blk,at,bg) Constructing wrapper function "set_irotmq"... irotmq = set_irotmq(xq,s,nsymq,nsym,minus_q,bg,at,lgamma) Constructing wrapper function "get_tau_sc_latvec"... tau_sc_latvec = get_tau_sc_latvec(tau_sc,latvec,at_sc,[nat_sc,nr]) Constructing wrapper function "permute_v3"... permute_v3(v3,[n]) Constructing wrapper function "permute_v4"... permute_v4(v4,[n]) Constructing wrapper function "trans_v2"... trans_v2(v2,tau_sc_latvec,[nat_sc,nr]) Constructing wrapper function "trans_v3"... trans_v3(v3,tau_sc_latvec,[nat_sc,nr]) Constructing wrapper function "trans_v4"... trans_v4(v4,tau_sc_latvec,[nat_sc,nr]) Constructing wrapper function "sym_v2"... sym_v2(v2,at_sc,bg_sc,s,irt,nsym,[nat_sc]) Constructing wrapper function "sym_v3"... sym_v3(v3,at_sc,s,irt,nsym,[nat_sc]) Constructing wrapper function "sym_v4"... sym_v4(v4,at_sc,s,irt,nsym,[nat_sc]) Constructing wrapper function "print_symm"... print_symm(s,nsym,irt,supercell,[nat]) Constructing wrapper function "threetosix_real"... mat6 = threetosix_real(mat3,[nat]) Constructing wrapper function "sixtothree_real"... mat3 = sixtothree_real(mat6,[nat]) Creating wrapper for Fortran subroutine "get_latvec"("get_latvec")... Constructing wrapper function "get_latvec"... latvec = get_latvec(tau_sc,tau,itau,nr,[nat,nat_sc]) Constructing wrapper function "contract_two_ph_propagator"... f_output = contract_two_ph_propagator(w_array,w_mu,t,smearing,m,[n_w,n_modes]) Constructing wrapper function "get_two_phonon_propagator"... chi = get_two_phonon_propagator(w_value,ws,t,smearing,[n_w]) Constructing wrapper function "get_q_grid"... q_list = get_q_grid(bg,supercell_size,n_size) Constructing wrapper function "rgd_blk"... rgd_blk(nr1,nr2,nr3,dyn,q,tau,epsil,zeu,bg,omega,alat,loto_2d,sign,[nat]) Constructing wrapper function "nonanal"... nonanal(itau_blk,epsil,q,zeu,omega,dyn,[nat,nat_blk]) Constructing wrapper function "trasl"... phid = trasl(phiq,nq,nr1,nr2,nr3,m1,m2,m3,[nat]) Constructing wrapper function "get_translations"... trans = get_translations(pols,masses,[nmod,nat]) Constructing wrapper function "get_equivalent_atoms"... eq_atoms = get_equivalent_atoms(coords1,coords2,unit_cell,ityp1,ityp2,[nat]) Constructing wrapper function "get_closest_vector"... new_v_dist = get_closest_vector(unit_cell,v_dist) Constructing wrapper function "get_gr_data"... r_value,gr = get_gr_data(cells,coords,ityp,type1,type2,r_min,r_max,n_r,[n_structs,nat]) Constructing wrapper function "fix_coords_in_unit_cell"... new_coords = fix_coords_in_unit_cell(coords,unit_cell,[nat]) Constructing wrapper function "matinv3"... b = matinv3(a) Constructing F90 module support for "symm_base"... Variables: eps1 eps2 s sr sname ft ftau nrot nsym nsym_ns nsym_na t_rev no_t_rev time_reversal irt invs invsym d1 d2 d3 allfrac nofrac nosym nosym_evc at bg getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' Constructing wrapper function "symm_base.set_accep_threshold"... set_accep_threshold(thr) Constructing wrapper function "symm_base.get_accep_threshold"... thr = get_accep_threshold() Constructing wrapper function "symm_base.set_at_bg"... set_at_bg(new_at,new_bg) Constructing wrapper function "symm_base.inverse_s"... inverse_s() Constructing wrapper function "symm_base.set_sym_bl"... set_sym_bl() Constructing wrapper function "symm_base.find_sym"... find_sym(tau,ityp,nr1,nr2,nr3,magnetic_sym,m_loc,[nat]) Constructing wrapper function "symm_base.sgam_at"... sym = sgam_at(tau,ityp,nr1,nr2,nr3,[nat]) Constructing wrapper function "symm_base.sgam_at_mag"... sgam_at_mag(m_loc,sym,[nat]) Constructing wrapper function "symm_base.set_sym"... set_sym(tau,ityp,nspin_mag,m_loc,nr1,nr2,nr3,[nat]) Creating wrapper for Fortran function "copy_sym"("copy_sym")... Constructing wrapper function "symm_base.copy_sym"... copy_sym = copysym(nrot,sym) Creating wrapper for Fortran function "is_group"("is_group")... Constructing wrapper function "symm_base.is_group"... is_group = is_group() Creating wrapper for Fortran function "eqvect"("eqvect")... Constructing wrapper function "symm_base.eqvect"... eqvect = eqvect(x,y,f) Creating wrapper for Fortran function "checksym"("checksym")... Constructing wrapper function "symmbase.checksym"... checksym = checksym(irot,ityp,xau,rau,ft,[nat]) Constructing wrapper function "symm_base.checkallsym"... checkallsym(tau,ityp,nr1,nr2,nr3,[nat]) Constructing wrapper function "symm_base.s_axis_to_cart"... s_axis_to_cart() Constructing wrapper function "symm_base.smallg_q"... minus_q = smallg_q(aq,modenum,sym) Constructing F90 module support for "io_global"... Variables: stdout_bn ionode ionode_id meta_ionode meta_ionode_id xmlinputunit xmloutputunit xmltmpunit Constructing wrapper function "io_global.io_global_start"... io_global_start(mpime,ionode_set) Constructing wrapper function "io_global.meta_io_global_start"... meta_io_global_start(mpime,ionode_set) Constructing wrapper function "io_global.io_global_getionode"... ionode_out,ionode_id_out = io_global_getionode() Constructing wrapper function "io_global.io_global_getmeta"... io_global_getmeta(myrank,root) Constructing F90 module support for "kinds"... Variables: dp sgl i4b Constructing wrapper function "kinds.print_kind_info"... print_kind_info(stdout_bn) Constructing F90 module support for "constants"... Variables: pi tpi fpi sqrtpi sqrtpm1 sqrt2 h_planck_si k_boltzmann_si electron_si electronvolt_si electronmass_si hartree_si rydberg_si bohr_radius_si amu_si c_si munought_si epsnought_si k_boltzmann_au k_boltzmann_ry autoev rytoev amu_au amu_ry au_sec au_ps au_gpa ry_kbar debye_si au_debye ev_to_kelvin ry_to_kelvin evtonm rytonm c_au eps4 eps6 eps8 eps12 eps14 eps16 eps24 eps32 gsmall e2 degspin bohr_radius_cm bohr_radius_angs angstrom_au dip_debye au_terahertz au_to_ohmcmm1 ry_to_thz ry_to_ghz ry_to_cmm1 avogadro Wrote C/API module "symph" to file "build/src.linux-x86_64-3.9/symphmodule.c" Fortran 77 wrappers are saved to "build/src.linux-x86_64-3.9/symph-f2pywrappers.f" Fortran 90 wrappers are saved to "build/src.linux-x86_64-3.9/symph-f2pywrappers2.f90" INFO: adding 'build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9/fortranobject.c' to sources. INFO: adding 'build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9' to include_dirs. creating build/src.linux-x86_64-3.9/build creating build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9 copying /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/f2py/src/fortranobject.c -> build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9 copying /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/f2py/src/fortranobject.h -> build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9 INFO: adding 'build/src.linux-x86_64-3.9/symph-f2pywrappers.f' to sources. INFO: adding 'build/src.linux-x86_64-3.9/symph-f2pywrappers2.f90' to sources. INFO: building extension "cc_linalg" sources INFO: building extension "thirdorder" sources INFO: f2py options: [] INFO: f2py:> build/src.linux-x86_64-3.9/thirdordermodule.c sortvarnames: failed to compute dependencies because of cyclic dependencies between nq1, nq2, nq3, centered Reading fortran codes... Reading file 'FModules/third_order_centering.f90' (format:free) Reading file 'FModules/third_order_ASR.f90' (format:free) Reading file 'FModules/third_order_interpol.f90' (format:free) Reading file 'FModules/third_order_dynbubble.f90' (format:free) Post-processing... Block: thirdorder Block: third_order_centering Block: analysis Block: center Block: center_sparse Block: pre_center Block: assign Block: within_dmax Block: compute_perimeter Block: three_to_one_len Block: three_to_one Block: one_to_three_len Block: one_to_three Block: min_el_wise_2 Block: max_el_wise_2 Block: min_el_wise_3 Block: max_el_wise_3 Block: cryst_to_cart Block: third_order_asr Block: initialize_r2index Block: initialize_perm Block: geq Block: f Block: impose_perm_sym Block: impose_asr_3rd Block: impose_asr Block: third_order_interpol Block: interpol Block: third_order_bubble Block: compute_static_bubble Block: compute_dynamic_bubble Block: compute_diag_dynamic_bubble Block: compute_perturb_selfnrg Block: compute_spectralf Block: compute_spectralf_diag Block: lambda Block: lambda_dynamic Block: lambda_dynamic_value Block: bose_freq Block: f_bose In: :thirdorder:FModules/third_order_dynbubble.f90:third_order_bubble:f_bose analyzevars: prefix ('elemental') were not used Block: df_bose Block: invzmat Block: eliminate_transl Post-processing (stage 2)... Block: thirdorder Block: unknown_interface Block: third_order_centering Block: analysis Block: center Block: center_sparse Block: pre_center Block: assign Block: within_dmax Block: compute_perimeter Block: three_to_one_len Block: three_to_one Block: one_to_three_len Block: one_to_three Block: min_el_wise_2 Block: max_el_wise_2 Block: min_el_wise_3 Block: max_el_wise_3 Block: cryst_to_cart Block: third_order_asr Block: initialize_r2index Block: initialize_perm Block: geq Block: f Block: impose_perm_sym Block: impose_asr_3rd Block: impose_asr Block: third_order_interpol Block: interpol Block: third_order_bubble Block: compute_static_bubble Block: compute_dynamic_bubble Block: compute_diag_dynamic_bubble Block: compute_perturb_selfnrg Block: compute_spectralf Block: compute_spectralf_diag Block: lambda Block: lambda_dynamic Block: lambda_dynamic_value Block: bose_freq Block: f_bose Block: df_bose Block: invzmat Block: eliminate_transl Building modules... Building module "thirdorder"... Constructing F90 module support for "third_order_centering"... Constructing wrapper function "third_order_centering.analysis"... weight,xr2,xr3 = analysis(far,tol,dmax,sc_size,xr2_list,xr3_list,alat,tau,tensor,[nat,n_blocks]) Constructing wrapper function "third_order_centering.center"... centered = center(original,weight,xr2_list,xr2,xr3_list,xr3,far,[nat,n_blocks,n_blocks_old]) Constructing wrapper function "third_order_centering.center_sparse"... centered,n_sparse_blocks,xr2_sparse_list,xr3_sparse_list,atom_sparse_list,r_blocks_sparse_list = center_sparse(original,weight,xr2_list,xr2,xr3_list,xr3,far,[nat,n_sup,n_blocks]) Constructing wrapper function "third_order_centering.pre_center"... centered,lat_min,lat_max = pre_center(far,tol,alat,tau,original,[nat,nq1,nq2,nq3]) Constructing wrapper function "third_order_centering.assign"... centered,x2,x3,r2,r3 = assign(alat,lat_min_prev,lat_max_prev,centered_prev,lat_min,lat_max,n_sup_ws,[nat,n_sup_ws_prev]) Creating wrapper for Fortran function "within_dmax"("within_dmax")... Constructing wrapper function "third_order_centering.within_dmax"... within_dmax = within_dmax(v1,v2,v3,d1,d2,d3,tol) Creating wrapper for Fortran function "compute_perimeter"("compute_perimeter")... Constructing wrapper function "third_order_centering.compute_perimeter"... compute_perimeter = compute_perimeter(v1,v2,v3) Creating wrapper for Fortran function "three_to_one_len"("three_to_one_len")... Constructing wrapper function "third_order_centering.three_to_one_len"... three_to_one_len = three_to_one_len(v,v_min,v_len) Creating wrapper for Fortran function "three_to_one"("three_to_one")... Constructing wrapper function "third_order_centering.three_to_one"... three_to_one = three_to_one(v,v_min,v_max) Creating wrapper for Fortran function "one_to_three_len"("one_to_three_len")... Constructing wrapper function "third_order_centering.one_to_three_len"... one_to_three_len = one_to_three_len(j,v_min,v_len) Creating wrapper for Fortran function "one_to_three"("one_to_three")... Constructing wrapper function "third_order_centering.one_to_three"... one_to_three = one_to_three(j,v_min,v_max) Creating wrapper for Fortran function "min_el_wise_2"("min_el_wise_2")... Constructing wrapper function "third_order_centering.min_el_wise_2"... min_el_wise_2 = min_el_wise_2(a,b) Creating wrapper for Fortran function "max_el_wise_2"("max_el_wise_2")... Constructing wrapper function "third_order_centering.max_el_wise_2"... max_el_wise_2 = max_el_wise_2(a,b) Creating wrapper for Fortran function "min_el_wise_3"("min_el_wise_3")... Constructing wrapper function "third_order_centering.min_el_wise_3"... min_el_wise_3 = min_el_wise_3(a,b,c) Creating wrapper for Fortran function "max_el_wise_3"("max_el_wise_3")... Constructing wrapper function "third_order_centering.max_el_wise_3"... max_el_wise_3 = max_el_wise_3(a,b,c) Creating wrapper for Fortran function "cryst_to_cart"("cryst_to_cart")... Constructing wrapper function "third_order_centering.cryst_to_cart"... cryst_to_cart = cryst_to_cart(v,alat) Constructing F90 module support for "third_order_asr"... Variables: perm_initialized p r2index_initialized index_blocks_r2 num_blocks_r2 getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' Constructing wrapper function "third_order_asr.initialize_r2index"... initialize_r2index(xr2,xr2list,pbc,[totnum_r2,n_blocks,sclat]) Constructing wrapper function "third_order_asr.initialize_perm"... initialize_perm(r23,sclat,pbc,[n_blocks]) Creating wrapper for Fortran function "geq"("geq")... Constructing wrapper function "third_order_asr.geq"... geq = geq(v1,v2,lat,pbc) Creating wrapper for Fortran function "f"("f")... Constructing wrapper function "third_order_asr.f"... f = f(x) Constructing wrapper function "third_order_asr.impose_perm_sym"... fcvar,fc_sym = impose_perm_sym(fc,r23,sclat,pbc,verbose,[nat,n_blocks]) Constructing wrapper function "third_order_asr.impose_asr_3rd"... fcvar,sum3rd,fc_asr = impose_asr_3rd(fc,xr2,xr2list,pow,sclat,pbc,verbose,[totnum_r2,nat,n_blocks]) Constructing wrapper function "third_order_asr.impose_asr"... fc_out = impose_asr(fc,r23,xr2,xr2list,pow,sclat,pbc,threshold,maxite,verbose,[totnum_r2,nat,n_blocks]) Constructing F90 module support for "third_order_interpol"... Constructing wrapper function "third_order_interpol.interpol"... fc_interp = interpol(fc,r2,r3,q2,q3,[n_blocks,nat]) Constructing F90 module support for "third_order_bubble"... Constructing wrapper function "third_order_bubble.compute_static_bubble"... bubble = compute_static_bubble(t,freq,is_gamma,d3,[n_mod]) Constructing wrapper function "third_order_bubble.compute_dynamic_bubble"... bubble = compute_dynamic_bubble(energies,sigma,static_limit,t,freq,is_gamma,d3,diag_approx,[ne,nsig,n_mod]) Constructing wrapper function "third_order_bubble.compute_diag_dynamic_bubble"... bubble = compute_diag_dynamic_bubble(energies,sigma,t,freq,is_gamma,d3,[ne,nsig,n_mod]) Constructing wrapper function "third_order_bubble.compute_perturb_selfnrg"... selfnrg = compute_perturb_selfnrg(sigma,t,freq,is_gamma,d3,[nsig,n_mod]) Constructing wrapper function "third_order_bubble.compute_spectralf"... spectralf = compute_spectralf(smear_id,ener,d2,pi,notransl,mass,[nat,ne,nsmear]) Constructing wrapper function "third_order_bubble.compute_spectralf_diag"... spectralf = compute_spectralf_diag(smear_id,ener,d2_freq,selfnrg,[nat,ne,nsmear]) Constructing wrapper function "third_order_bubble.lambda"... lambda_out = lambda(t,w_q2,w_q3) Constructing wrapper function "third_order_bubble.lambda_dynamic"... lambda_out = lambda_dynamic(energies,sigma,t,static_limit,w_q2,w_q3,[ne,nsigma]) Constructing wrapper function "third_order_bubble.lambda_dynamic_value"... lambda_out = lambda_dynamic_value(value,sigma,t,w_q2,w_q3,[n_mod,nsigma]) Constructing wrapper function "third_order_bubble.bose_freq"... bose = bose_freq(t,freq,[n_mod]) Creating wrapper for Fortran function "f_bose"("f_bose")... Constructing wrapper function "third_order_bubble.f_bose"... f_bose = f_bose(freq,t) Creating wrapper for Fortran function "df_bose"("df_bose")... Constructing wrapper function "third_order_bubble.df_bose"... df_bose = df_bose(freq,t) Constructing wrapper function "third_order_bubble.invzmat"... invzmat(a,[n]) Constructing wrapper function "third_order_bubble.eliminate_transl"... eliminate_transl(a,mass,[nat]) Wrote C/API module "thirdorder" to file "build/src.linux-x86_64-3.9/thirdordermodule.c" Fortran 90 wrappers are saved to "build/src.linux-x86_64-3.9/thirdorder-f2pywrappers2.f90" INFO: adding 'build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9/fortranobject.c' to sources. INFO: adding 'build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9' to include_dirs. INFO: adding 'build/src.linux-x86_64-3.9/thirdorder-f2pywrappers2.f90' to sources. INFO: building extension "secondorder" sources INFO: f2py options: [] INFO: f2py:> build/src.linux-x86_64-3.9/secondordermodule.c Reading fortran codes... Reading file 'FModules/second_order_centering.f90' (format:free) Reading file 'FModules/second_order_ASR.f90' (format:free) Post-processing... Block: secondorder Block: second_order_centering Block: analysis Block: center Block: within_dmax Block: compute_perimeter Block: cryst_to_cart Block: second_order_asr Block: initialize_perm Block: clear_all Block: geq Block: impose_perm_sym Block: impose_asr_2nd Block: impose_asr Post-processing (stage 2)... Block: secondorder Block: unknown_interface Block: second_order_centering Block: analysis Block: center Block: within_dmax Block: compute_perimeter Block: cryst_to_cart Block: second_order_asr Block: initialize_perm Block: clear_all Block: geq Block: impose_perm_sym Block: impose_asr_2nd Block: impose_asr Building modules... Building module "secondorder"... Constructing F90 module support for "second_order_centering"... Constructing wrapper function "second_order_centering.analysis"... weight,xr2 = analysis(far,tol,dmax,sc_size,xr2_list,alat,tau,tensor,[nat,n_blocks]) Constructing wrapper function "second_order_centering.center"... centered = center(original,weight,xr2_list,xr2,far,[nat,n_blocks,n_blocks_old]) Creating wrapper for Fortran function "within_dmax"("within_dmax")... Constructing wrapper function "second_order_centering.within_dmax"... within_dmax = within_dmax(v1,v2,d1,d2,tol) Creating wrapper for Fortran function "compute_perimeter"("compute_perimeter")... Constructing wrapper function "second_order_centering.compute_perimeter"... compute_perimeter = compute_perimeter(v1,v2) Creating wrapper for Fortran function "cryst_to_cart"("cryst_to_cart")... Constructing wrapper function "second_order_centering.cryst_to_cart"... cryst_to_cart = cryst_to_cart(v,alat) Constructing F90 module support for "second_order_asr"... Variables: perm_initialized p getarrdims:warning: assumed shape array, using 0 instead of ':' Constructing wrapper function "second_order_asr.initialize_perm"... initialize_perm(r2,sclat,pbc,[n_blocks]) Constructing wrapper function "second_order_asr.clear_all"... clear_all() Creating wrapper for Fortran function "geq"("geq")... Constructing wrapper function "second_order_asr.geq"... geq = geq(v1,v2,lat,pbc) Constructing wrapper function "second_order_asr.impose_perm_sym"... fcvar,fc_sym = impose_perm_sym(fc,r2,sclat,pbc,verbose,[nat,n_blocks]) Constructing wrapper function "second_order_asr.impose_asr_2nd"... fcvar,sum2nd,fc_asr = impose_asr_2nd(fc,pow,sclat,pbc,verbose,[nat,n_blocks]) Constructing wrapper function "second_order_asr.impose_asr"... fc_out = impose_asr(fc,r2,pow,sclat,pbc,threshold,maxite,verbose,[nat,n_blocks]) Wrote C/API module "secondorder" to file "build/src.linux-x86_64-3.9/secondordermodule.c" Fortran 90 wrappers are saved to "build/src.linux-x86_64-3.9/secondorder-f2pywrappers2.f90" INFO: adding 'build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9/fortranobject.c' to sources. INFO: adding 'build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9' to include_dirs. INFO: adding 'build/src.linux-x86_64-3.9/secondorder-f2pywrappers2.f90' to sources. INFO: build_src: building npy-pkg config files running build_py creating build/lib.linux-x86_64-3.9 creating build/lib.linux-x86_64-3.9/cellconstructor copying cellconstructor/Units.py -> build/lib.linux-x86_64-3.9/cellconstructor copying cellconstructor/init.py -> build/lib.linux-x86_64-3.9/cellconstructor copying cellconstructor/Methods.py -> build/lib.linux-x86_64-3.9/cellconstructor copying cellconstructor/Timer.py -> build/lib.linux-x86_64-3.9/cellconstructor copying cellconstructor/AnharmonicForceFields.py -> build/lib.linux-x86_64-3.9/cellconstructor copying cellconstructor/ForceTensor.py -> build/lib.linux-x86_64-3.9/cellconstructor copying cellconstructor/calculators.py -> build/lib.linux-x86_64-3.9/cellconstructor copying cellconstructor/Phonons.py -> build/lib.linux-x86_64-3.9/cellconstructor copying cellconstructor/Settings.py -> build/lib.linux-x86_64-3.9/cellconstructor copying cellconstructor/Spectral.py -> build/lib.linux-x86_64-3.9/cellconstructor copying cellconstructor/symmetries.py -> build/lib.linux-x86_64-3.9/cellconstructor copying cellconstructor/Bands.py -> build/lib.linux-x86_64-3.9/cellconstructor copying cellconstructor/Manipulate.py -> build/lib.linux-x86_64-3.9/cellconstructor copying cellconstructor/Structure.py -> build/lib.linux-x86_64-3.9/cellconstructor creating build/lib.linux-x86_64-3.9/cellconstructor/SymData copying cellconstructor/SymData/60.dat -> build/lib.linux-x86_64-3.9/cellconstructor/SymData copying cellconstructor/SymData/15.dat -> build/lib.linux-x86_64-3.9/cellconstructor/SymData copying cellconstructor/SymData/36.dat -> build/lib.linux-x86_64-3.9/cellconstructor/SymData copying cellconstructor/SymData/64.dat -> build/lib.linux-x86_64-3.9/cellconstructor/SymData copying cellconstructor/SymData/36_red.dat -> build/lib.linux-x86_64-3.9/cellconstructor/SymData running build_ext INFO: customize UnixCCompiler INFO: customize UnixCCompiler using build_ext INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-march=native) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

creating /tmp/tmpll9orm2p/work creating /tmp/tmpll9orm2p/work/home creating /tmp/tmpll9orm2p/work/home/uuuuuu creating /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3 creating /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs creating /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4 creating /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib creating /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9 creating /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages creating /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy creating /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils creating /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-march=native' INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-O3) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-O3' INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-Werror) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-Werror' INFO: CCompilerOpt.init[1709] : check requested baseline INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-msse) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse' INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-msse2) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse2' INFO: CCompilerOpt.feature_test[1474] : testing feature 'SSE' with flags (-msse -msse2) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse -msse2 -Werror' INFO: CCompilerOpt.feature_test[1474] : testing feature 'SSE2' with flags (-msse -msse2) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse -msse2 -Werror' INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-msse3) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse3' INFO: CCompilerOpt.feature_test[1474] : testing feature 'SSE3' with flags (-msse -msse2 -msse3) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse -msse2 -msse3 -Werror' INFO: CCompilerOpt.init[1718] : check requested dispatch-able features INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-mssse3) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-mssse3' INFO: CCompilerOpt.feature_test[1474] : testing feature 'SSSE3' with flags (-msse -msse2 -msse3 -mssse3) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse -msse2 -msse3 -mssse3 -Werror' INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-msse4.1) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse4.1' INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-mpopcnt) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-mpopcnt' INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-msse4.2) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse4.2' INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-mavx) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-mavx' INFO: CCompilerOpt.feature_test[1474] : testing feature 'AVX' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -Werror' INFO: CCompilerOpt.feature_test[1474] : testing feature 'SSE41' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -Werror' INFO: CCompilerOpt.feature_test[1474] : testing feature 'SSE42' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -Werror' INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-mf16c) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-mf16c' INFO: CCompilerOpt.feature_test[1474] : testing feature 'F16C' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -Werror' INFO: CCompilerOpt.feature_test[1474] : testing feature 'POPCNT' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -Werror' INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-mfma) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-mfma' INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-mavx2) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-mavx2' INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-mavx512f) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-mavx512f' WARN: CCompilerOpt.dist_test[590] : CCompilerOpt._dist_test_spawn[724] : Command (gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/test_flags.c -o /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/test_flags.o -MMD -MF /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/test_flags.o.d -mavx512f) failed with exit status 1 output -> gcc: error: unrecognized command line option ‘-mavx512f’

WARN: CCompilerOpt.cc_test_flags[1025] : testing failed INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-mavx512cd) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-mavx512cd' WARN: CCompilerOpt.dist_test[590] : CCompilerOpt._dist_test_spawn[724] : Command (gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/test_flags.c -o /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/test_flags.o -MMD -MF /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/test_flags.o.d -mavx512cd) failed with exit status 1 output -> gcc: error: unrecognized command line option ‘-mavx512cd’

WARN: CCompilerOpt.cc_test_flags[1025] : testing failed INFO: CCompilerOpt.feature_test[1474] : testing feature 'AVX512CD' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -Werror' WARN: CCompilerOpt.dist_test[590] : CCompilerOpt._dist_test_spawn[724] : Command (gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512cd.c -o /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512cd.o -MMD -MF /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512cd.o.d -msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -Werror) failed with exit status 1 output -> /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512cd.c: In function ‘main’: /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512cd.c:18:5: error: unknown type name ‘m512i’ m512i a = _mm512_lzcnt_epi32(_mm512_loadu_si512((const m512i*)argv[argc-1])); ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512cd.c:18:5: error: implicit declaration of function ‘_mm512_lzcnt_epi32’ [-Werror=implicit-function-declaration] /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512cd.c:18:5: error: implicit declaration of function ‘_mm512_loadu_si512’ [-Werror=implicit-function-declaration] /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512cd.c:18:5: error: unknown type name ‘m512i’ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512cd.c:19:5: error: implicit declaration of function ‘_mm512_castsi512_si128’ [-Werror=implicit-function-declaration] return _mm_cvtsi128_si32(_mm512_castsi512_si128(a)); ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512cd.c:19:5: error: incompatible type for argument 1 of ‘_mm_cvtsi128_si32’ In file included from /usr/lib/gcc/x86_64-redhat-linux/4.8.5/include/xmmintrin.h:1246:0, from /usr/lib/gcc/x86_64-redhat-linux/4.8.5/include/immintrin.h:32, from /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512cd.c:14: /usr/lib/gcc/x86_64-redhat-linux/4.8.5/include/emmintrin.h:205:1: note: expected ‘m128i’ but argument is of type ‘int’ _mm_cvtsi128_si32 (m128i __A) ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512cd.c:20:1: error: control reaches end of non-void function [-Werror=return-type] } ^ cc1: all warnings being treated as errors

WARN: CCompilerOpt.feature_test[1490] : testing failed INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-mavx512vl -mavx512bw -mavx512dq) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-mavx512vl -mavx512bw -mavx512dq' WARN: CCompilerOpt.dist_test[590] : CCompilerOpt._dist_test_spawn[724] : Command (gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/test_flags.c -o /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/test_flags.o -MMD -MF /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/test_flags.o.d -mavx512vl -mavx512bw -mavx512dq) failed with exit status 1 output -> gcc: error: unrecognized command line option ‘-mavx512vl’ gcc: error: unrecognized command line option ‘-mavx512bw’ gcc: error: unrecognized command line option ‘-mavx512dq’

WARN: CCompilerOpt.cc_test_flags[1025] : testing failed INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-mavx512vnni) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-mavx512vnni' WARN: CCompilerOpt.dist_test[590] : CCompilerOpt._dist_test_spawn[724] : Command (gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/test_flags.c -o /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/test_flags.o -MMD -MF /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/test_flags.o.d -mavx512vnni) failed with exit status 1 output -> gcc: error: unrecognized command line option ‘-mavx512vnni’

WARN: CCompilerOpt.cc_test_flags[1025] : testing failed INFO: CCompilerOpt.feature_test[1474] : testing feature 'AVX512_CLX' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -Werror' WARN: CCompilerOpt.dist_test[590] : CCompilerOpt._dist_test_spawn[724] : Command (gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_clx.c -o /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_clx.o -MMD -MF /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_clx.o.d -msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -Werror) failed with exit status 1 output -> /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_clx.c: In function ‘main’: /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_clx.c:19:5: error: unknown type name ‘m512i’ m512i a = _mm512_loadu_si512((const m512i*)argv[argc-1]); ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_clx.c:19:5: error: implicit declaration of function ‘_mm512_loadu_si512’ [-Werror=implicit-function-declaration] /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_clx.c:19:5: error: unknown type name ‘__m512i’ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_clx.c:20:13: error: implicit declaration of function ‘_mm512_dpbusd_epi32’ [-Werror=implicit-function-declaration] a = _mm512_dpbusd_epi32(a, _mm512_setzero_si512(), a); ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_clx.c:20:13: error: implicit declaration of function ‘_mm512_setzero_si512’ [-Werror=implicit-function-declaration] /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_clx.c:21:5: error: implicit declaration of function ‘_mm512_castsi512_si128’ [-Werror=implicit-function-declaration] return _mm_cvtsi128_si32(_mm512_castsi512_si128(a)); ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_clx.c:21:5: error: incompatible type for argument 1 of ‘_mm_cvtsi128_si32’ In file included from /usr/lib/gcc/x86_64-redhat-linux/4.8.5/include/xmmintrin.h:1246:0, from /usr/lib/gcc/x86_64-redhat-linux/4.8.5/include/immintrin.h:32, from /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_clx.c:14: /usr/lib/gcc/x86_64-redhat-linux/4.8.5/include/emmintrin.h:205:1: note: expected ‘m128i’ but argument is of type ‘int’ _mm_cvtsi128_si32 (m128i A) ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_clx.c:22:1: error: control reaches end of non-void function [-Werror=return-type] } ^ cc1: all warnings being treated as errors

WARN: CCompilerOpt.feature_test[1490] : testing failed INFO: CCompilerOpt.feature_test[1474] : testing feature 'AVX512_SKX' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -Werror' WARN: CCompilerOpt.dist_test[590] : CCompilerOpt._dist_test_spawn[724] : Command (gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_skx.c -o /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_skx.o -MMD -MF /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_skx.o.d -msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -Werror) failed with exit status 1 output -> /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_skx.c: In function ‘main’: /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_skx.c:18:5: error: unknown type name ‘m512i’ m512i aa = _mm512_abs_epi32(_mm512_loadu_si512((const m512i*)argv[argc-1])); ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_skx.c:18:5: error: implicit declaration of function ‘_mm512_abs_epi32’ [-Werror=implicit-function-declaration] /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_skx.c:18:5: error: implicit declaration of function ‘_mm512_loadu_si512’ [-Werror=implicit-function-declaration] /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_skx.c:18:5: error: unknown type name ‘m512i’ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_skx.c:20:5: error: implicit declaration of function ‘_mm256_abs_epi64’ [-Werror=implicit-function-declaration] m256i a = _mm256_abs_epi64(_mm512_extracti64x4_epi64(aa, 1)); ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_skx.c:20:5: error: implicit declaration of function ‘_mm512_extracti64x4_epi64’ [-Werror=implicit-function-declaration] /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_skx.c:20:17: error: incompatible types when initializing type ‘m256i’ using type ‘int’ m256i a = _mm256_abs_epi64(_mm512_extracti64x4_epi64(aa, 1)); ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_skx.c:22:5: error: unknown type name ‘m512i’ m512i b = _mm512_broadcast_i32x8(a); ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_skx.c:22:5: error: implicit declaration of function ‘_mm512_broadcast_i32x8’ [-Werror=implicit-function-declaration] /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_skx.c:24:5: error: implicit declaration of function ‘_mm512_abs_epi16’ [-Werror=implicit-function-declaration] b = _mm512_abs_epi16(b); ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_skx.c:25:5: error: implicit declaration of function ‘_mm512_castsi512_si128’ [-Werror=implicit-function-declaration] return _mm_cvtsi128_si32(_mm512_castsi512_si128(b)); ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_skx.c:25:5: error: incompatible type for argument 1 of ‘_mm_cvtsi128_si32’ In file included from /usr/lib/gcc/x86_64-redhat-linux/4.8.5/include/xmmintrin.h:1246:0, from /usr/lib/gcc/x86_64-redhat-linux/4.8.5/include/immintrin.h:32, from /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_skx.c:14: /usr/lib/gcc/x86_64-redhat-linux/4.8.5/include/emmintrin.h:205:1: note: expected ‘m128i’ but argument is of type ‘int’ _mm_cvtsi128_si32 (m128i A) ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_skx.c:26:1: error: control reaches end of non-void function [-Werror=return-type] } ^ cc1: all warnings being treated as errors

WARN: CCompilerOpt.feature_test[1490] : testing failed INFO: CCompilerOpt.feature_test[1474] : testing feature 'AVX512F' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -Werror' WARN: CCompilerOpt.dist_test[590] : CCompilerOpt._dist_test_spawn[724] : Command (gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512f.c -o /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512f.o -MMD -MF /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512f.o.d -msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -Werror) failed with exit status 1 output -> /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512f.c: In function ‘main’: /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512f.c:18:5: error: unknown type name ‘m512i’ m512i a = _mm512_abs_epi32(_mm512_loadu_si512((const m512i*)argv[argc-1])); ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512f.c:18:5: error: implicit declaration of function ‘_mm512_abs_epi32’ [-Werror=implicit-function-declaration] /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512f.c:18:5: error: implicit declaration of function ‘_mm512_loadu_si512’ [-Werror=implicit-function-declaration] /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512f.c:18:5: error: unknown type name ‘m512i’ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512f.c:19:5: error: implicit declaration of function ‘_mm512_castsi512_si128’ [-Werror=implicit-function-declaration] return _mm_cvtsi128_si32(_mm512_castsi512_si128(a)); ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512f.c:19:5: error: incompatible type for argument 1 of ‘_mm_cvtsi128_si32’ In file included from /usr/lib/gcc/x86_64-redhat-linux/4.8.5/include/xmmintrin.h:1246:0, from /usr/lib/gcc/x86_64-redhat-linux/4.8.5/include/immintrin.h:32, from /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512f.c:14: /usr/lib/gcc/x86_64-redhat-linux/4.8.5/include/emmintrin.h:205:1: note: expected ‘m128i’ but argument is of type ‘int’ _mm_cvtsi128_si32 (m128i __A) ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512f.c:20:1: error: control reaches end of non-void function [-Werror=return-type] } ^ cc1: all warnings being treated as errors

WARN: CCompilerOpt.feature_test[1490] : testing failed INFO: CCompilerOpt.feature_test[1474] : testing feature 'AVX2' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mavx2) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mavx2 -Werror' INFO: CCompilerOpt.feature_test[1474] : testing feature 'FMA3' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -Werror' INFO: CCompilerOpt.cc_test_flags[1021] : testing flags (-mavx512er -mavx512pf) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-mavx512er -mavx512pf' WARN: CCompilerOpt.dist_test[590] : CCompilerOpt._dist_test_spawn[724] : Command (gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/test_flags.c -o /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/test_flags.o -MMD -MF /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/test_flags.o.d -mavx512er -mavx512pf) failed with exit status 1 output -> gcc: error: unrecognized command line option ‘-mavx512er’ gcc: error: unrecognized command line option ‘-mavx512pf’

WARN: CCompilerOpt.cc_test_flags[1025] : testing failed INFO: CCompilerOpt.feature_test[1474] : testing feature 'AVX512_KNL' with flags (-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2) INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

INFO: compile options: '-I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -Werror' WARN: CCompilerOpt.dist_test[590] : CCompilerOpt._dist_test_spawn[724] : Command (gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_knl.c -o /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_knl.o -MMD -MF /tmp/tmpll9orm2p/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_knl.o.d -msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -Werror) failed with exit status 1 output -> /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_knl.c: In function ‘main’: /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_knl.c:19:5: error: unknown type name ‘m512d’ m512d ad = _mm512_loadu_pd((const __m512d*)argv[argc-1]); ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_knl.c:19:5: error: implicit declaration of function ‘_mm512_loadu_pd’ [-Werror=implicit-function-declaration] /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_knl.c:19:5: error: unknown type name ‘m512d’ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_knl.c:21:5: error: unknown type name ‘m512i’ __m512i a = _mm512_castpd_si512(_mm512_exp2a23_pd(ad)); ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_knl.c:21:5: error: implicit declaration of function ‘_mm512_castpd_si512’ [-Werror=implicit-function-declaration] /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_knl.c:21:5: error: implicit declaration of function ‘_mm512_exp2a23_pd’ [-Werror=implicit-function-declaration] /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_knl.c:23:5: error: implicit declaration of function ‘_mm512_mask_prefetch_i64scatter_pd’ [-Werror=implicit-function-declaration] _mm512_mask_prefetch_i64scatter_pd(base, _mm512_cmpeq_epi64_mask(a, a), a, 1, _MM_HINT_T1); ^ /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/distutils/checks/cpu_avx512_knl.c:23:5: error: implicit declaration of function ‘_mm512_cmpeq_epi64_mask’ [-Werror=implicit-function-declaration] cc1: all warnings being treated as errors

WARN: CCompilerOpt.feature_test[1490] : testing failed INFO: CCompilerOpt.init[1730] : skip features (SSE2 SSE3 SSE) since its part of baseline INFO: CCompilerOpt.init[1734] : initialize targets groups INFO: CCompilerOpt.init[1736] : parse target group simd_test INFO: CCompilerOpt._parse_target_tokens[1947] : skip targets (FMA4 NEON VSX3 AVX512_SKX XOP VSX2 ASIMD AVX512F VSX) not part of baseline or dispatch-able features INFO: CCompilerOpt._parse_policy_not_keepbase[2059] : skip baseline features (SSE2) INFO: CCompilerOpt.generate_dispatch_header[2280] : generate CPU dispatch header: (build/src.linux-x86_64-3.9/numpy/distutils/include/npy_cpu_dispatch_config.h) WARN: CCompilerOpt.generate_dispatch_header[2289] : dispatch header dir build/src.linux-x86_64-3.9/numpy/distutils/include does not exist, creating it INFO: get_default_fcompiler: matching types: '['arm', 'gnu95', 'intel', 'lahey', 'pg', 'nv', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor', 'fujitsu']' INFO: customize ArmFlangCompiler WARN: Could not locate executable armflang INFO: customize Gnu95FCompiler INFO: Found executable /usr/bin/gfortran INFO: customize Gnu95FCompiler INFO: customize Gnu95FCompiler using build_ext INFO: building 'symph' extension INFO: compiling C sources INFO: C compiler: gcc -pthread -B /work/home/zhaowb/anaconda3/envs/sscha/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -I/work/home/zhaowb/anaconda3/envs/sscha/include -fPIC -O2 -isystem /work/home/zhaowb/anaconda3/envs/sscha/include -fPIC

creating build/temp.linux-x86_64-3.9/build creating build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9 creating build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/build creating build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9 INFO: compile options: '-Ibuild/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9 -I/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/core/include -Ibuild/src.linux-x86_64-3.9/numpy/distutils/include -I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-msse -msse2 -msse3' INFO: gcc: build/src.linux-x86_64-3.9/symphmodule.c INFO: gcc: build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9/fortranobject.c In file included from /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1960:0, from /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, from build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9/fortranobject.h:13, from build/src.linux-x86_64-3.9/symphmodule.c:20: /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]

warning "Using deprecated NumPy API, disable it with " \

^ In file included from /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1960:0, from /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, from build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9/fortranobject.h:13, from build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9/fortranobject.c:2: /work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]

warning "Using deprecated NumPy API, disable it with " \

^ build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9/fortranobject.c: In function ‘find_first_negative_dimension’: build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9/fortranobject.c:707:5: error: ‘for’ loop initial declarations are only allowed in C99 mode for (int i = 0; i < rank; ++i) { ^ build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9/fortranobject.c:707:5: note: use option -std=c99 or -std=gnu99 to compile your code build/src.linux-x86_64-3.9/symphmodule.c: In function ‘f2py_setup_symm_base’: build/src.linux-x86_64-3.9/symphmodule.c:12387:37: warning: assignment from incompatible pointer type [enabled by default] f2py_symm_base_def[i_f2py++].func = irt; ^ build/src.linux-x86_64-3.9/symphmodule.c: At top level: build/src.linux-x86_64-3.9/symphmodule.c:201:12: warning: ‘f2py_size’ defined but not used [-Wunused-function] static int f2py_size(PyArrayObject* var, ...) ^ INFO: compiling Fortran 90 module sources INFO: Fortran f77 compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -fPIC -O3 -funroll-loops Fortran f90 compiler: /usr/bin/gfortran -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops Fortran fix compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops creating build/temp.linux-x86_64-3.9/FModules INFO: compile options: '-Ibuild/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9 -I/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/core/include -Ibuild/src.linux-x86_64-3.9/numpy/distutils/include -I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-Jbuild/temp.linux-x86_64-3.9/ -Ibuild/temp.linux-x86_64-3.9/' INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/symm_base.f90 FModules/symm_base.f90:870.33:

integer :: na, kpol, isym, i, j, k, l 1 Warning: Unused variable 'j' declared at (1) FModules/symm_base.f90:870.36:

integer :: na, kpol, isym, i, j, k, l 1 Warning: Unused variable 'k' declared at (1) FModules/symm_base.f90:870.39:

integer :: na, kpol, isym, i, j, k, l 1 Warning: Unused variable 'l' declared at (1) FModules/symm_base.f90:858.44:

subroutine checkallsym ( nat, tau, ityp, nr1, nr2, nr3 ) 1 Warning: Unused dummy argument 'nr1' at (1) FModules/symm_base.f90:858.49:

subroutine checkallsym ( nat, tau, ityp, nr1, nr2, nr3 ) 1 Warning: Unused dummy argument 'nr2' at (1) FModules/symm_base.f90:858.54:

subroutine checkallsym ( nat, tau, ityp, nr1, nr2, nr3 ) 1 Warning: Unused dummy argument 'nr3' at (1) FModules/symm_base.f90:420.34:

integer :: na, kpol, nb, irot, i, j 1 Warning: Unused variable 'i' declared at (1) FModules/symm_base.f90:420.37:

integer :: na, kpol, nb, irot, i, j 1 Warning: Unused variable 'j' declared at (1) FModules/symm_base.f90:420.21:

integer :: na, kpol, nb, irot, i, j 1 Warning: Unused variable 'kpol' declared at (1) FModules/symm_base.f90: In function ‘checksym’: FModules/symm_base.f90:808:0: warning: ‘__resultchecksym’ may be used uninitialized in this function [-Wmaybe-uninitialized] logical function checksym ( irot, nat, ityp, xau, rau, ft ) ^ INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/io_global.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/kind.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/constants.f90 INFO: compiling Fortran sources INFO: Fortran f77 compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -fPIC -O3 -funroll-loops Fortran f90 compiler: /usr/bin/gfortran -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops Fortran fix compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops INFO: compile options: '-Ibuild/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9 -I/work/home/uuuuuu/anaconda3/envs/sscha-V4/lib/python3.9/site-packages/numpy/core/include -Ibuild/src.linux-x86_64-3.9/numpy/distutils/include -I/work/home/uuuuuu/anaconda3/envs/sscha-V4/include/python3.9 -c' extra options: '-Jbuild/temp.linux-x86_64-3.9/ -Ibuild/temp.linux-x86_64-3.9/' INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/symdynph_gq_new.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/sgam_ph.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/invmat.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/set_asr.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/error_handler.f90 FModules/error_handler.f90:35.22:

INTEGER :: crashunit 1 Warning: Unused variable 'crashunit' declared at (1) INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/flush_unit.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/symvector.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/fc_supercell_from_dyn.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/set_tau.f90 FModules/set_tau.f90:12.11:

INTEGER i,i1,i2,i3,na,na_blk 1 Warning: Unused variable 'i' declared at (1) INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/cryst_to_car.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/recips.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/q2qstar_out.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/rotate_and_add_dyn.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/trntnsc.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/star_q.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/eqvect.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/symm_matrix.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/from_matdyn.f90 FModules/from_matdyn.f90:12.51:

      ipol, jpol, na, nb, m1, m2, m3, nint, i,j, nrws, nrwsx
                                               1

Warning: Unused variable 'j' declared at (1) FModules/from_matdyn.f90:12.46:

      ipol, jpol, na, nb, m1, m2, m3, nint, i,j, nrws, nrwsx
                                          1

Warning: Unused variable 'nint' declared at (1) INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/interp.f90 FModules/interp.f90:90.14:

integer :: i, j, info 1 Warning: Unused variable 'i' declared at (1) FModules/interp.f90:90.17:

integer :: i, j, info 1 Warning: Unused variable 'j' declared at (1) FModules/interp.f90:91.27:

character (len=3) :: logi 1 Warning: Unused variable 'logi' declared at (1) FModules/interp.f90:88.42:

double precision, dimension(3) :: vector 1 Warning: Unused variable 'vector' declared at (1) INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/q_gen.f90 FModules/q_gen.f90:1.42:

SUBROUTINE q_gen(nsc,qbid,at_blk,bg_blk,at,bg) 1 Warning: Unused dummy argument 'at' at (1) INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/smallgq.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/symmetry_high_rank.f90 FModules/symmetry_high_rank.f90:1139.47:

subroutine print_symm ( s, nsym, irt, supercell, nat) 1 Warning: Unused dummy argument 'supercell' at (1) FModules/symmetry_high_rank.f90:179.34:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'is' declared at (1) FModules/symmetry_high_rank.f90:179.38:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'js' declared at (1) FModules/symmetry_high_rank.f90:179.24:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'k' declared at (1) FModules/symmetry_high_rank.f90:179.15:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'ka' declared at (1) FModules/symmetry_high_rank.f90:179.27:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'l' declared at (1) FModules/symmetry_high_rank.f90:179.42:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'la' declared at (1) FModules/symmetry_high_rank.f90:179.46:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'r1' declared at (1) FModules/symmetry_high_rank.f90:179.50:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'r2' declared at (1) FModules/symmetry_high_rank.f90:237.34:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'is' declared at (1) FModules/symmetry_high_rank.f90:237.38:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'js' declared at (1) FModules/symmetry_high_rank.f90:237.15:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'ka' declared at (1) FModules/symmetry_high_rank.f90:237.27:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'l' declared at (1) FModules/symmetry_high_rank.f90:237.42:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'la' declared at (1) FModules/symmetry_high_rank.f90:237.46:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'r1' declared at (1) FModules/symmetry_high_rank.f90:237.50:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'r2' declared at (1) FModules/symmetry_high_rank.f90:326.48:

logical, dimension(:), allocatable :: assigned 1 Warning: Unused variable 'assigned' declared at (1) FModules/symmetry_high_rank.f90:327.34:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'is' declared at (1) FModules/symmetry_high_rank.f90:327.38:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'js' declared at (1) FModules/symmetry_high_rank.f90:327.15:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'ka' declared at (1) FModules/symmetry_high_rank.f90:327.42:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'la' declared at (1) FModules/symmetry_high_rank.f90:327.46:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'r1' declared at (1) FModules/symmetry_high_rank.f90:327.50:

integer :: ka, i, j, k, l, r, is, js, la, r1, r2 1 Warning: Unused variable 'r2' declared at (1) FModules/symmetry_high_rank.f90:323.63:

double precision, dimension(:,:,:,:,:,:), allocatable :: v3_6 1 Warning: Unused variable 'v3_6' declared at (1) FModules/symmetry_high_rank.f90:405.43:

integer :: iq, i, j, k, alpha, beta, gamm 1 Warning: Unused variable 'gamm' declared at (1) FModules/symmetry_high_rank.f90:405.15:

integer :: iq, i, j, k, alpha, beta, gamm 1 Warning: Unused variable 'iq' declared at (1) FModules/symmetry_high_rank.f90:405.24:

integer :: iq, i, j, k, alpha, beta, gamm 1 Warning: Unused variable 'k' declared at (1) FModules/symmetry_high_rank.f90:401.23:

INTEGER :: na, nb, nc, isym, nar, nbr, ncr 1 Warning: Unused variable 'nc' declared at (1) FModules/symmetry_high_rank.f90:401.44:

INTEGER :: na, nb, nc, isym, nar, nbr, ncr 1 Warning: Unused variable 'ncr' declared at (1) FModules/symmetry_high_rank.f90:554.15:

integer :: iq, i, j, k, alpha, beta, gamm 1 Warning: Unused variable 'iq' declared at (1) FModules/symmetry_high_rank.f90:756.15:

integer :: iq, i, j, k, l, alpha, beta, gamm, delt 1 Warning: Unused variable 'iq' declared at (1) INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/unwrap_tensors.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/get_latvec.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/contract_two_phonon_propagator.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/get_q_grid_fast.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/eff_charge_interp.f90 FModules/eff_charge_interp.f90:21.15:

    at(3,3),        &! direct     lattice basis vectors
           1

Warning: Unused variable 'at' declared at (1) FModules/eff_charge_interp.f90:35.23:

real :: time1, time2 1 Warning: Unused variable 'time2' declared at (1) FModules/eff_charge_interp.f90: In function ‘rgd_blk’: FModules/eff_charge_interp.f90:154:0: warning: ‘r’ may be used uninitialized in this function [-Wmaybe-uninitialized] facgd = facexp(-geg/alph/4.0d0)/SQRT(geg)/(1.0+rSQRT(geg)) ^ INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/get_translations.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: FModules/get_equivalent_atoms.f90 INFO: extra f90 options: '-cpp' INFO: gfortran:f90: build/src.linux-x86_64-3.9/symph-f2pywrappers2.f90 build/src.linux-x86_64-3.9/symph-f2pywrappers2.f90:98.10:

  use symm_base, only : eps1
      1

Warning: Unused module variable 'irt' which has been explicitly imported at (1) INFO: gfortran:f77: build/src.linux-x86_64-3.9/symph-f2pywrappers.f INFO: /usr/bin/gfortran -Wall -g -Wall -g -shared build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/symphmodule.o build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9/fortranobject.o build/temp.linux-x86_64-3.9/FModules/symm_base.o build/temp.linux-x86_64-3.9/FModules/io_global.o build/temp.linux-x86_64-3.9/FModules/kind.o build/temp.linux-x86_64-3.9/FModules/constants.o build/temp.linux-x86_64-3.9/FModules/symdynph_gq_new.o build/temp.linux-x86_64-3.9/FModules/sgam_ph.o build/temp.linux-x86_64-3.9/FModules/invmat.o build/temp.linux-x86_64-3.9/FModules/set_asr.o build/temp.linux-x86_64-3.9/FModules/error_handler.o build/temp.linux-x86_64-3.9/FModules/flush_unit.o build/temp.linux-x86_64-3.9/FModules/symvector.o build/temp.linux-x86_64-3.9/FModules/fc_supercell_from_dyn.o build/temp.linux-x86_64-3.9/FModules/set_tau.o build/temp.linux-x86_64-3.9/FModules/cryst_to_car.o build/temp.linux-x86_64-3.9/FModules/recips.o build/temp.linux-x86_64-3.9/FModules/q2qstar_out.o build/temp.linux-x86_64-3.9/FModules/rotate_and_add_dyn.o build/temp.linux-x86_64-3.9/FModules/trntnsc.o build/temp.linux-x86_64-3.9/FModules/star_q.o build/temp.linux-x86_64-3.9/FModules/eqvect.o build/temp.linux-x86_64-3.9/FModules/symm_matrix.o build/temp.linux-x86_64-3.9/FModules/from_matdyn.o build/temp.linux-x86_64-3.9/FModules/interp.o build/temp.linux-x86_64-3.9/FModules/q_gen.o build/temp.linux-x86_64-3.9/FModules/smallgq.o build/temp.linux-x86_64-3.9/FModules/symmetry_high_rank.o build/temp.linux-x86_64-3.9/FModules/unwrap_tensors.o build/temp.linux-x86_64-3.9/FModules/get_latvec.o build/temp.linux-x86_64-3.9/FModules/contract_two_phonon_propagator.o build/temp.linux-x86_64-3.9/FModules/get_q_grid_fast.o build/temp.linux-x86_64-3.9/FModules/eff_charge_interp.o build/temp.linux-x86_64-3.9/FModules/get_translations.o build/temp.linux-x86_64-3.9/FModules/get_equivalent_atoms.o build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/symph-f2pywrappers.o build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/symph-f2pywrappers2.o -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -llapack -lblas -lgfortran -o build/lib.linux-x86_64-3.9/symph.cpython-39-x86_64-linux-gnu.so gfortran: error: build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9/fortranobject.o: No such file or directory error: Command "/usr/bin/gfortran -Wall -g -Wall -g -shared build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/symphmodule.o build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/build/src.linux-x86_64-3.9/fortranobject.o build/temp.linux-x86_64-3.9/FModules/symm_base.o build/temp.linux-x86_64-3.9/FModules/io_global.o build/temp.linux-x86_64-3.9/FModules/kind.o build/temp.linux-x86_64-3.9/FModules/constants.o build/temp.linux-x86_64-3.9/FModules/symdynph_gq_new.o build/temp.linux-x86_64-3.9/FModules/sgam_ph.o build/temp.linux-x86_64-3.9/FModules/invmat.o build/temp.linux-x86_64-3.9/FModules/set_asr.o build/temp.linux-x86_64-3.9/FModules/error_handler.o build/temp.linux-x86_64-3.9/FModules/flush_unit.o build/temp.linux-x86_64-3.9/FModules/symvector.o build/temp.linux-x86_64-3.9/FModules/fc_supercell_from_dyn.o build/temp.linux-x86_64-3.9/FModules/set_tau.o build/temp.linux-x86_64-3.9/FModules/cryst_to_car.o build/temp.linux-x86_64-3.9/FModules/recips.o build/temp.linux-x86_64-3.9/FModules/q2qstar_out.o build/temp.linux-x86_64-3.9/FModules/rotate_and_add_dyn.o build/temp.linux-x86_64-3.9/FModules/trntnsc.o build/temp.linux-x86_64-3.9/FModules/star_q.o build/temp.linux-x86_64-3.9/FModules/eqvect.o build/temp.linux-x86_64-3.9/FModules/symm_matrix.o build/temp.linux-x86_64-3.9/FModules/from_matdyn.o build/temp.linux-x86_64-3.9/FModules/interp.o build/temp.linux-x86_64-3.9/FModules/q_gen.o build/temp.linux-x86_64-3.9/FModules/smallgq.o build/temp.linux-x86_64-3.9/FModules/symmetry_high_rank.o build/temp.linux-x86_64-3.9/FModules/unwrap_tensors.o build/temp.linux-x86_64-3.9/FModules/get_latvec.o build/temp.linux-x86_64-3.9/FModules/contract_two_phonon_propagator.o build/temp.linux-x86_64-3.9/FModules/get_q_grid_fast.o build/temp.linux-x86_64-3.9/FModules/eff_charge_interp.o build/temp.linux-x86_64-3.9/FModules/get_translations.o build/temp.linux-x86_64-3.9/FModules/get_equivalent_atoms.o build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/symph-f2pywrappers.o build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/symph-f2pywrappers2.o -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -llapack -lblas -lgfortran -o build/lib.linux-x86_64-3.9/symph.cpython-39-x86_64-linux-gnu.so" failed with exit status 1 INFO: ########### EXT COMPILER OPTIMIZATION ########### INFO: Platform : Architecture: x64 Compiler : gcc

CPU baseline : Requested : 'min' Enabled : SSE SSE2 SSE3 Flags : -msse -msse2 -msse3 Extra checks: none

CPU dispatch : Requested : 'max -xop -fma4' Enabled : SSSE3 SSE41 POPCNT SSE42 AVX F16C FMA3 AVX2 Generated : none INFO: CCompilerOpt.cache_flush[817] : write cache to path -> /work/home/uuuuuu/software/sscha/serial/CellConstructor-master/build/temp.linux-x86_64-3.9/ccompiler_opt_cache_ext.py