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STOmics
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SAW
GNU General Public License v3.0
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04.register's errors ？？
#104
Boundless1
closed
4 months ago
2
Input for stereopy
#103
maximelepetit
closed
5 months ago
5
no <stainType>_SN_mask.tif file in 04.register directory
#102
niexiaoqing
closed
4 months ago
19
tissue.gef missing
#101
Guy2Horev
opened
5 months ago
3
ERROR IN register
#100
niexiaoqing
closed
4 months ago
2
cellCluster Failed
#99
myshu2017-03-14
closed
4 months ago
3
Incompatible matplotlib and numpy version in the .sif files
#98
MathurinD
opened
6 months ago
2
upgrade ipr and tar image
#97
DMaspero
closed
4 months ago
1
partially initialized module 'cv2' has no attribute 'gapi_wip_gst_GStreamerPipeline'
#96
tenlives
closed
7 months ago
6
Manual Registration part 2 failure
#95
raforsyth
closed
4 days ago
12
failed to register
#94
Sooooooooda
closed
4 months ago
1
singularity exec SAW_7.0.sif failed
#93
tenlives
closed
7 months ago
6
SAW-A40704 in Manual_part2
#92
JungTaeKim103
closed
7 months ago
2
Inquiry on Manual Registration Process
#91
JungTaeKim103
closed
7 months ago
3
Building genome index references are not correct
#90
gringer
closed
4 months ago
1
Script requires `bash`
#89
gringer
closed
4 months ago
1
Issues with Image Registration: How to Obtain Upstream Files Compatible with MOSTA from SAW Analysis
#88
LiTing99-cutie
closed
4 months ago
4
fault(genomic Parameter verification failed.) on Mapping
#87
ultraypy
closed
8 months ago
2
ERROR SAW-A40704
#86
JungTaeKim103
closed
8 months ago
6
stereo.core.StPipeline.find_marker_genes in multi-sample
#85
sparkumr
closed
8 months ago
2
report：KeyError: 'mapped_reads'
#84
hgl2017
closed
8 months ago
4
SAW-A40001: The version of 0.1.0 is too low to deliver automatic registration
#83
QAU-JackZhang
closed
8 months ago
6
SAW-A10300:genomic Parameter vertification failed
#82
RookieA1
closed
8 months ago
16
Segmentation fault(core dumped) on tissueCut
#81
OswaldZhang
closed
8 months ago
9
Manual Registration Part 2 Error
#80
raforsyth
closed
4 months ago
3
register KeyError: "Can't open attribute (can't locate attribute: 'WhichStitch')"
#79
iichelhadi
closed
10 months ago
2
Why can't I just use docker mount to run the command?
#78
RADIOMUMM
closed
4 months ago
5
SAW 7.0 - Can't generate genome index
#77
gringer
closed
10 months ago
1
SAW-A10102 There is a bug in fastq-PE segmentation.
#76
Lucas-Maciel
closed
8 months ago
1
Error in mapping: SAW-A10200: please give input file and output file
#75
chstellar
closed
10 months ago
2
数据集下载验证码失效！
#74
Pennyroyal-Tea
closed
10 months ago
1
A rotation function would be quite intriguing?
#73
Li-ZhiD
closed
8 months ago
2
RuntimeError: module compiled against API version 0xf but this version of numpy is 0xe
#72
ViHammer
closed
10 months ago
3
tissue and cell segmentation model
#71
MariaRosariaNucera
closed
11 months ago
4
Readme is not updated
#70
chstellar
closed
10 months ago
0
Dose the GTF file downloaded from GENOCE need to be filtered?
#69
Li-ZhiD
closed
4 months ago
2
Update stereoPipeline_v6.1_manual_part2.sh
#68
Clouate
closed
1 year ago
1
Update stereoPipeline_v6.1_manual_part2.sh
#67
Clouate
closed
1 year ago
0
SAW 6.1 ImageQC 2.1 tar package name issue
#66
OnkarMulay
closed
1 year ago
2
How is the "reads_with_dnb" value calculated?
#65
deepcard
closed
4 months ago
1
Where can I download the test data?
#64
Feng-Zhang
closed
1 year ago
2
KeyError: "Unable to open object (object 'TemplatePoint' doesn't exist)"
#63
OnkarMulay
closed
8 months ago
17
Suggestion: add --bind options for singularity in stereoPipeline.sh
#62
WeipengMO
closed
1 year ago
1
Q about Stereo-seq mouse cerebral cortex experssion matrix
#61
wang-qf
closed
1 year ago
2
Error running spatialCluster: no locator available for file
#60
ChangqingW
closed
1 year ago
1
Is it allowed to run code without singularity?
#59
liuxiawei
closed
4 months ago
1
error in lasso function
#58
HenriettaHolze
closed
4 months ago
5
Inconsistent names in help message from mapping
#57
ChangqingW
closed
4 months ago
2
How to read the results of SAW into seurat
#56
zhongll19
closed
4 months ago
2
Mapped reads all annotated to INTERGENIC
#55
duchen-whu
closed
8 months ago
2
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