Project Aeon's main library for interfacing with acquired data. Contains modules for raw data file io, data querying, data processing, data qc, database ingestion, and building computational data pipelines.
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Find nested key breaks if inner value is None #419
It's unclear why this does not reproduce using my remote CEPH environment (maybe a python version issue), but while running a local environment I started seeing None object errors in the following line while reading SLEAP pose data using the Pose reader object:
This seems to be because of various entries which are indeed None in the confmap_config.json. One alternative might be to simply continue if v is None but we should investigate the whole issue a bit better to understand what is the underlying root cause.
It's unclear why this does not reproduce using my remote CEPH environment (maybe a python version issue), but while running a local environment I started seeing
Noneobject errors in the following line while reading SLEAP pose data using thePosereader object:https://github.com/SainsburyWellcomeCentre/aeon_mecha/blob/7812b4fbbda6fd679fae26c926be2f09baaae781/aeon/util.py#L13
This seems to be because of various entries which are indeed
Nonein theconfmap_config.json. One alternative might be to simplycontinueifv is Nonebut we should investigate the whole issue a bit better to understand what is the underlying root cause.