maximum reference sequence length for Rsubread?

ShiLab-Bioinformatics / ShiLab-Bioinformatics.github.io

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Open THccaa opened 1 year ago

THccaa commented 1 year ago

I was wondering, is there a possibility to index genomes > 4 billion bp? I do have sufficient memory, but indexing throughs an error everytime.

ShiLab-Bioinformatics commented 1 year ago

The current data structures/data types in our programs only support refence genomes as large as 4 billion bases.