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ShobiStassen
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PARC
MIT License
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Rename and modify `fit_predict`
#47
ahill187
opened
1 day ago
0
`requirements.txt` and `setup.py`
#46
ahill187
opened
2 months ago
0
Input data types
#45
ahill187
opened
2 months ago
0
Tests
#44
ahill187
opened
2 months ago
0
Unnecessary copy of edgelist?
#43
Stein-ErikG
opened
2 months ago
1
`small_pop` not found
#42
ahill187
opened
3 months ago
0
Fix `small_community_size` bug
#41
ahill187
opened
3 months ago
0
Refactor `make_knn_struct`
#40
ahill187
opened
3 months ago
0
Factor out `prune_global`
#39
ahill187
opened
3 months ago
0
New argument `jac_threshold_type`
#38
ahill187
opened
3 months ago
0
Refactor `prune_local`
#37
ahill187
opened
3 months ago
0
Refactor `knngraph_full` -> `create_knn_graph`
#36
ahill187
opened
3 months ago
0
Factor out `get_leiden_partition`
#35
ahill187
opened
3 months ago
0
Factor out `compute_performance_metrics`
#34
ahill187
opened
3 months ago
0
Add docstrings and properties to the constructor
#33
ahill187
opened
3 months ago
0
Variable renaming
#32
ahill187
opened
3 months ago
0
`func_mode` -> `get_mode`
#31
ahill187
opened
3 months ago
0
Code cleanup
#30
ahill187
opened
3 months ago
0
Add logging
#29
ahill187
opened
3 months ago
0
Refactor `prune_local`
#28
ahill187
closed
3 months ago
0
Update _parc.py
#27
ShobiStassen
closed
5 months ago
0
Fix simplicial set embedding bug
#26
ahill187
closed
5 months ago
1
`run_umap_hnsw` doesn't work
#25
ahill187
closed
5 months ago
0
Minor bug in run_toobig_subPARC
#24
santoshputta
closed
5 months ago
0
Import of umap increases PARC import time
#23
JcGKitten
opened
1 year ago
1
Hyperclustering with PARC
#22
peterpath
opened
1 year ago
1
Questions on using PARC for identifying plasma cells
#21
nilaj-c
opened
2 years ago
1
RStudio crashing when clustering a large dataset
#20
Stein-ErikG
opened
2 years ago
12
Hello! I am getting AttributeError, when trying to import parc
#19
quantumkisa
closed
2 years ago
2
Python igraph
#18
luglilab
closed
2 years ago
4
Question on pruning big cluster
#17
ivan-marroquin
closed
2 years ago
2
Error when running UMAP
#16
rjesud
opened
3 years ago
3
About the true labels for calculating the F1 scores
#15
li000678
opened
3 years ago
2
Relaxation of leidenalg==0.7.0 requirement?
#14
ajitjohnson
closed
4 years ago
2
Fixed Bug: pre-computed neighbors-graph and small clusters
#13
tommycelsius
closed
4 years ago
0
Added class parameter for pre-computed nearest neighbor graph.
#12
tommycelsius
closed
4 years ago
0
Tips for replicating the performance on the lung cell clustering
#11
tom-b
closed
4 years ago
3
any plan to release an R version of PARC?
#10
cirobotta
opened
4 years ago
4
Controlling the number of clusters
#9
ajitjohnson
closed
4 years ago
4
Amazing work!
#8
SansMorel
closed
2 weeks ago
6
Bugs in Example Usage 3
#7
esimonds
closed
4 years ago
2
Example Usage 2 has some code typos
#6
esimonds
closed
4 years ago
2
np.reshape error if too many edges are pruned
#5
ezunder
closed
5 years ago
1
Add vertices explicitly during G_sim construction.
#4
ezunder
closed
5 years ago
0
pip install issue: Mac OS X and AWS Linux
#3
wyattmcdonnell
opened
5 years ago
3
Easy distance metric and thread usage
#2
wyattmcdonnell
closed
5 years ago
0
Add support for reproducible Leiden clustering
#1
wyattmcdonnell
closed
5 years ago
0