Smithsonian / CCN-Data-Library

The Coastal Carbon Network Data Library: An open-source database featuring carbon data from tidal wetlands around the world
https://serc.si.edu/coastalcarbon
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Provide missing site ids #39

Closed mlonneman closed 11 months ago

mlonneman commented 5 years ago

Many depthseries intervals are missing site ID values that exist on core-level metadata. It is being added in the CCRCN map application, which is not an ideal location to do this. Ensure all depthseries entries have site IDs within the hook scripts in the data library.

jaxinewolfe commented 2 years ago

The following studies have core tables with missing site_ids: "Thom_1992" "Copertino_unpublished"

The following studies have depthseries tables with missing site_id: study_id site_id 1 Watson_and_Byrne_2013 NA
2 Thom_1992 NA 3 Breithaupt_et_al_2017 NA
4 Cochran_et_al_1998 NA
5 Noe_et_al_2013 NA
6 CRMS_Database NA
7 Drake_et_al_2015 NA
8 Elsey_Quirk_et_al_2011 NA
9 Hill_and_Anisfeld_2015 NA
10 Kulawardhana_et_al_2015 NA
11 Merrill_1999 NA
12 Neubauer_2002 NA
13 Nuttle_1996 NA
14 Nyman_et_al_1993 NA
15 Orson_1990 NA
16 Pastore_et_al_2017 NA
17 Piazza_et_al_2011 NA
18 Radabaugh_et_al_2018 NA
19 Windham_Meyers_et_al_2010 NA
20 Drexler_et_al_2009 NA

@cheneyr @BettsH Most of these are in the Holmquist 2018 synthesis. Except Watson and Byrne 2013, Thom 1992, and Drexler 2009 I believe. The core tables in each of these hook scripts should have all the site IDs. I would just create a lookup table of study and sites from those IDs and join it to the depthseries. I'll take on Thom 1992 since to see what's going on there in both of the tables. Don't worry about Copertino. Leave a comment to indicate which studies you're taking on so we don't edit the same hook scripts and have a merge conflict :)

cheneyr commented 2 years ago

@jaxinewolfe @BettsH I can start looking at Watson and Byrne 2013!

jaxinewolfe commented 2 years ago

Great! I'll take the Holmquist 2018 as well and @BettsH you take the Drexler 2009?

BettsH commented 2 years ago

added missing site_id to Drexler et al 2009

BettsH commented 2 years ago

Here's the checklist of the studies for adding site_ids to their depthseries tables: