Snitkin-Lab-Umich / regentrans

regentrans: R package for investigating regional pathogen transmission using genomic data
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Fix `check_locs()` #54

Closed zenalapp closed 2 years ago

zenalapp commented 3 years ago

I found this weird bug. This doesn't work:

get_pair_types(dists, factor(locs))

I think we should change the check so that factors are allowed (and make sure it doesn't change anything downstream, or change it to a character within the function).

zenalapp commented 2 years ago

Fixed