SomaLogic / SomaDataIO

The SomaDataIO package loads and exports 'SomaScan' data via the 'SomaLogic Operating Co., Inc.' proprietary data file, called an ADAT ('*.adat'). The package also exports auxiliary functions for manipulating, wrangling, and extracting relevant information from an ADAT object once in memory.
https://somalogic.github.io/SomaDataIO/
Other
26 stars 18 forks source link

Bugfix write adat apply #52

Closed stufield closed 1 year ago

stufield commented 1 year ago

Bugfix for single SOMAmer ADATs

codecov-commenter commented 1 year ago

Codecov Report

Patch coverage: 100.00% and project coverage change: +0.34 :tada:

Comparison is base (0cb7a9a) 80.98% compared to head (88135e3) 81.33%.

:exclamation: Current head 88135e3 differs from pull request most recent head c0a3219. Consider uploading reports for the commit c0a3219 to get more accurate results

:exclamation: Your organization is not using the GitHub App Integration. As a result you may experience degraded service beginning May 15th. Please install the Github App Integration for your organization. Read more.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #52 +/- ## ========================================== + Coverage 80.98% 81.33% +0.34% ========================================== Files 30 30 Lines 1194 1200 +6 ========================================== + Hits 967 976 +9 + Misses 227 224 -3 ``` | [Impacted Files](https://app.codecov.io/gh/SomaLogic/SomaDataIO/pull/52?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=SomaLogic) | Coverage Δ | | |---|---|---| | [R/loadAdatsAsList.R](https://app.codecov.io/gh/SomaLogic/SomaDataIO/pull/52?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=SomaLogic#diff-Ui9sb2FkQWRhdHNBc0xpc3QuUg==) | `95.65% <ø> (ø)` | | | [R/utils.R](https://app.codecov.io/gh/SomaLogic/SomaDataIO/pull/52?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=SomaLogic#diff-Ui91dGlscy5S) | `31.81% <ø> (+2.03%)` | :arrow_up: | | [R/write-adat.R](https://app.codecov.io/gh/SomaLogic/SomaDataIO/pull/52?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=SomaLogic#diff-Ui93cml0ZS1hZGF0LlI=) | `89.13% <100.00%> (+1.17%)` | :arrow_up: |

:umbrella: View full report in Codecov by Sentry.
:loudspeaker: Do you have feedback about the report comment? Let us know in this issue.