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SouthGreenPlatform
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arcad-hts
Scripts for the analysis of high-throughput sequencing data from the ARCAD project.
http://www.arcad-project.org/
GNU General Public License v3.0
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help message of marker_to_ab.pl
#20
timflutre
opened
7 years ago
0
arcad_hts_7_genotyper_call.pl: Option Method haplotype_caller pour GATK
#19
sidibebocs
opened
8 years ago
0
Allow extra tags for @RG in arcad-hts_4_mapping
#18
timflutre
closed
9 years ago
1
Save alignments directly in BAM in arcad-hts_4_mapping
#17
timflutre
opened
9 years ago
0
Add tags in header of BAM from arcad-hts_4_mapping
#16
timflutre
opened
9 years ago
3
Add summary after mapping
#15
timflutre
opened
9 years ago
0
bug in arcad_hts_4_Mapping_Arcad.pl
#14
timflutre
closed
9 years ago
1
Make an option in for -fixMisencodedQuals in arcad_hts_6_bamRealignerRecalibrate.pl
#13
nrode
closed
9 years ago
1
Clean sp5 scripts
#12
gsarah
opened
9 years ago
0
Unify scripts with common prefix "arcad_"
#11
timflutre
opened
9 years ago
1
Use the pkg version in each script
#10
timflutre
opened
9 years ago
1
Use semantic versioning
#9
timflutre
closed
9 years ago
1
Update davem_fastq.py
#8
Maillol
closed
9 years ago
0
Make Demultadapt handle zipped file
#7
gsarah
opened
9 years ago
3
lib/ is not installed by Makefile
#6
gsarah
closed
9 years ago
1
Missing scripts, thus preventing reproducibility
#5
timflutre
closed
9 years ago
5
Format script documentation
#4
gsarah
opened
10 years ago
0
Add sp1 scripts
#3
gsarah
closed
10 years ago
1
Change script names
#2
gsarah
closed
9 years ago
1
add Makefile with rule to build release
#1
timflutre
closed
10 years ago
1