SpatialHackathon / SpaceHack2023

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PAS and CHAOS metric optargs #218

Closed Jieran-S closed 9 months ago

Jieran-S commented 9 months ago

PAS and CHAOS require physical coordinate as input. I modify their optargs to achieve the following:

  1. adding options "physical_coordinate" in their optargs. Snakemake will check first if key "physical_coordiante" exists in the optargs file, then check if it's true. Tested in wip_wf_optargs branch and functional.

  2. Change metrics optargs schema file to notify future implementers about this option.