Closed ZoeChen96 closed 7 months ago
CSC4.Ncs
data with the button
and the error is:
Error using wave_clus>load_data_button_Callback
(line 230)
Less than 15 spikes detected
Error in gui_mainfcn (line 95)
feval(varargin{:});
Error in wave_clus (line 63)
gui_mainfcn(gui_State, varargin{:});
Error while evaluating UIControl Callback.
PS: I have an extra question about the dataset]. It has a wave_clus formatted sorting file, which I can read with sortingGT_all = se.read_waveclus(file_path = '/UCLA_data/UCLA_data/times_CSC4.mat')
. Can it be seen as a ground truth, or is it just a wave_clus result?
Maybe this question is out-of-scope of the SI project, but I see waveclus project is already archived so I can't put issues there, sorry for putting my question here...
@ZoeChen96, waveclus is archived as you pointed out @ferchaure may be able to help, but I'm not sure how much time they dedicate to the project any more. (@alejoe91 should we move waveclus to the legacy portion of the docs? to highlight that its not being fully supported any more?)
Hi @ZoeChen96, About the error I would check the sign of the detection.
I'm guessing that is a manually curated result... it can be used as ground truth in some applications. But probably the best way to find out that type of thing is writing to someone currently in the lab
@zm711 I left academia and I'm not sure of the current development around waveclus, maybe Hernan Rey will take care / update it. Waveclus has a lot of users, but not the particularly tech-savvy kind.... probably a difficult crowd for the current spikeinterface
I'm going to close this. @ZoeChen96 please take Fernando's advice and reach out to someone in the lab for further waveclu trouble shooting . But if you run into any other issues feel free to open a new issue :)
Dear,
I was trying a published single-channel dataset (dataset3) with WaveClus. However, I can't do it either in spikeinterface or Waveclus GUI.
1) In spikeinterface, what I did is:
And the error is: