Starlitnightly / omicverse

A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.
https://starlitnightly.github.io/omicverse/
GNU General Public License v3.0
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ov.single.cellfategenie function error #175

Open WeiQin2001 opened 1 month ago

WeiQin2001 commented 1 month ago

run the code of "5. Timing-associated genes analysis with cellfategenie", the error will be found :

image

but the _cellfategenie.py is there but not used rightly

image

marswh12312313 commented 1 month ago

I also have this problem.

WeiQin2001 commented 1 month ago

This part has been updated by the author, the new function is called Fate,you can try ov.single.fate()

marswh12312313 commented 1 month ago

Thanks. ov.single.Fate() works well.