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StevenVB12 / patternize

An R package for quantifying color pattern variation
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Installation error in Linux server #25

Open GinBay-Min opened 3 years ago

GinBay-Min commented 3 years ago

Dear Steven: Recently I tried to use patternize package to analyse groups of samples in Linux server. However, the R installation in Linux (not root) was too complicated. Later I installed R by Miniconda and the process was successful. But then I couldn't install patternize neither by 'install.packages()' nor by 'devtools::install_github()'. It came to some errors mainly about dependent packages failed to install for "rgdal", "imager", "ClusterR". I wonder whether I can install the patternize by Miniconda, which I have tried: 'conda install r-patternize' and didn't work. Any help will be grateful ! Ginbay

StevenVB12 commented 3 years ago

Hi Ginbay,

I haven't tried installing patternize this way. Can you try installing the requested dependencies yourself first? I'm guessing it's a permissions issue. Alternatively, if you do not have root permissions, maybe consider asking the administrator to install it for you.

Hope this helps,

Steven