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TRON-Bioinformatics
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EasyFuse
EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.
GNU General Public License v3.0
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Mouse references for 2.0.3?
#58
GHosking-01
opened
4 days ago
0
add extra indents to tool_frac calculation in merge_data.py
#57
Lies-VO
closed
3 weeks ago
0
No such file ‘easyfuse_ref_v2.tar.gz’
#56
Lies-VO
opened
3 months ago
0
Problem with Fusion Annotation
#55
MesudeBicak
closed
22 hours ago
1
Download reference archive
#54
onurtugalan
closed
11 months ago
2
Supporting Reads Number
#53
Tesson98
closed
22 hours ago
1
single end RNA-seq
#52
xiaoyanger01
closed
1 year ago
1
Typo in QC workflow
#51
joelnulsen
closed
1 year ago
2
merge master into main
#50
ibn-salem
closed
1 year ago
0
debug for software select and change neo-peptides length to customise from config file
#49
Leo-Guan-git
closed
8 months ago
0
Thread usage
#48
M-Farshchian
closed
22 hours ago
1
error with mapslice while using via docker
#47
Prathyusha-konda
opened
1 year ago
1
fetchdata.py / SOAPFuse issue
#46
DiprimaSa
opened
1 year ago
3
Does easyFuse provide reference files for mice?
#45
GAOwy123
closed
1 year ago
1
Merge 'dev' into 'master'
#44
patricksorn
closed
1 year ago
0
about version 1.3.7
#43
BGI2016
closed
22 hours ago
1
about soapfuse
#42
BGI2016
opened
1 year ago
8
Support for CHM13
#41
gitMakeCoffee
closed
1 year ago
1
FASTQ input
#40
gitMakeCoffee
closed
1 year ago
1
for arm64
#39
BGI2016
closed
1 year ago
1
Fresh frozen RNAseq compatible with prediction model？
#38
Tesson98
closed
1 year ago
1
Add integration tests
#37
priesgo
closed
1 year ago
0
Feature/cli subcommands
#36
priesgo
closed
1 year ago
0
Feature/ci tests
#35
priesgo
closed
1 year ago
0
EasyFuse skewer_wrapper.py problem
#34
Kimgyeongjun
closed
1 year ago
2
Fusion caller versions in EasyFuse Docker container produce non-deterministic output
#33
mobiusklein
closed
22 hours ago
1
Fastq files not picked up-running through singularity
#32
stanleyrc
closed
1 year ago
1
Merge restructure_code into dev
#31
patricksorn
closed
1 year ago
0
Dev
#30
patricksorn
closed
1 year ago
0
Release 1.3.7
#29
patricksorn
closed
1 year ago
0
Request access to the model with smaller feature sets that operate independently of the prediction tools
#28
PubuduSaneth
closed
1 year ago
2
install and run locally
#27
whiffen-cann
closed
22 hours ago
1
Fix Python compatibility issues
#26
patricksorn
closed
2 years ago
0
Fix version info
#25
patricksorn
closed
2 years ago
0
Tool spanning and junction read weights are 0 in random forest (issue in 1.3.6, not in 1.3.4; solution proposed)
#24
jrouhana
closed
1 year ago
3
Missing output file-format description
#23
PubuduSaneth
closed
2 years ago
1
Tool runtime
#22
BGI2016
closed
22 hours ago
4
Read counts from detected tools are not annotated correctly
#21
ibn-salem
closed
1 year ago
2
update README in master
#20
ibn-salem
closed
2 years ago
0
Update readme
#19
DavidWeberTRON
closed
2 years ago
1
issue in bowtie-InFusion
#18
M-Farshchian
closed
22 hours ago
2
case sensitive error when load ConfigParser or else
#17
maiconfaria
closed
1 year ago
8
Update documentation for new output format
#16
ibn-salem
closed
2 years ago
0
Release 1.3.6
#15
ibn-salem
closed
2 years ago
0
Release 1.3.6
#14
ibn-salem
closed
2 years ago
1
Fix singularity exec
#13
patricksorn
closed
2 years ago
0
Fix example output
#12
patricksorn
closed
2 years ago
0
Update requantify.py
#11
jrouhana
closed
1 year ago
1
Release 1.3.5
#10
patricksorn
closed
2 years ago
1
Merge for release 1.3.5
#9
patricksorn
closed
2 years ago
0
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