TheDeanLab / navigate

navigate - open source light-sheet microscope controls
https://thedeanlab.github.io/navigate/
Other
32 stars 7 forks source link

Add Histogram for Visualization #1005

Closed AdvancedImagingUTSW closed 1 month ago

AdvancedImagingUTSW commented 1 month ago

We have received some nice feedback from several individuals, and one common request is a histogram for visualization of the intensity data. This could be provided beneath the main image viewer. For example, the mesospim software has a nice vertically oriented histogram that allows immediate visualization of sample brightness and adjustment of the lookup table.

image

It looks like they do this with PyQtGraph, ImageView, which has a histogram widget that can be called with getHistogramWidget... Recreating similar functionality will probably be a bit of a pain in tkinter. https://pyqtgraph.readthedocs.io/en/latest/api_reference/widgets/imageview.html