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ToonVanDaele / trias-test

test repository ofr trias
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Improve GAM output data visualization #10

Open damianooldoni opened 4 years ago

damianooldoni commented 4 years ago

When we correct by using cobs as covariate, the classic output (via plot_ribbon_em function) doesn't give the best visualization. See example below: GAM_correct_baseline_5232464_Branta leucopsis

This is due to the effect of the covariate. Is there a way to snow the effects of covariates in a plot? Via draw(deriv1) I can see the effects of covariates on first derivative. It would be nice to see similar plots for the data itself. Do you know how to do it? Thanks!

damianooldoni commented 4 years ago

To compare, without covariate: GAM_basic_5232464_Branta leucopsis

So, the actual way of plotting is good for basic GAM but less intuitive if we correct based on class data.