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TranslatorSRI / Babel

Babel creates cliques of equivalent identifiers across many biomedical vocabularies.
MIT License
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Add support for overriding the default prefix order used to choose the preferred identifier #375

Open gaurav opened 1 week ago

gaurav commented 1 week ago

We currently use the Biolink preferred prefix mappings (with some exceptions, particularly around conflation) but there isn't any way to customize it, either across Babel or for individual compendium builders.

@matentzn asked for this.

matentzn commented 1 week ago

Yes, this is of great importance. For example, biolink currently prefers to normalize phenotypes to UMLS over HPO, which is not very desirable in most open data normalisation efforts! Thanks!