issues
search
TranslatorSRI
/
NodeNormalization
Service that produces Translator compliant nodes given a curie
MIT License
9
stars
6
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Workaround for missing type information
#223
gaurav
closed
6 months ago
1
Prevent errors in normalization from causing an entire batch to fail
#222
gaurav
closed
6 months ago
0
Reproducible error when using drug_chemical_conflate
#221
gaurav
closed
6 months ago
10
After restoring from backup, the order of preferred CURIEs after drug conflation is incorrect
#220
gaurav
closed
3 months ago
4
Provide evidence that NodeNorm can reliably support 20 sequential queries with a maximum of 10 seconds pause between each query (our current goal for performance in the short term)
#219
gaurav
opened
9 months ago
2
Add provenance/EPC to NodeNorm
#218
gaurav
opened
9 months ago
0
Include mappings from Wikidata for use in a Triple Pattern Fragments app
#217
gaurav
opened
10 months ago
0
Node descriptions
#216
YaphetKG
closed
10 months ago
0
Remove hardcoded TRAPI version
#215
gaurav
closed
6 months ago
0
support for LOINC curies
#214
gglusman
opened
11 months ago
1
Fix tests/test_callback.py
#213
gaurav
closed
11 months ago
1
Node descriptions
#212
YaphetKG
closed
11 months ago
1
initial implementation chem conflation
#211
cbizon
closed
8 months ago
3
Aspirin clique split differently between NameRes and NodeNorm
#210
gaurav
opened
11 months ago
0
orphanet prefix case
#209
colleenXu
closed
7 months ago
1
Trapi 14
#208
cbizon
closed
11 months ago
0
Add descriptions to NodeNorm
#207
gaurav
closed
9 months ago
1
UMLS:C4715636 ("Enforcement of vehicle emissions standards") is not a biolink:PhenotypicFeature
#206
gaurav
opened
1 year ago
0
Add benchmarking
#205
gaurav
closed
7 months ago
1
Attempt to replace nn-loading as a multi-pod job with a single-node self-contained pod
#204
gaurav
closed
2 months ago
1
Conflate Chirality? was: Two cliques for Coenzyme A
#203
amykglen
opened
1 year ago
3
Strategies for ensuring NodeNorm remains continuously online for Translator
#202
gaurav
opened
1 year ago
1
Upgrade `normalize_message` system to TRAPI 1.4
#201
gaurav
closed
9 months ago
1
Updated version from v2.0.10 to v2.1.1
#200
gaurav
closed
1 year ago
0
What proportion of NodeNorm concepts have information content values?
#199
gaurav
opened
1 year ago
3
Request for Normalization of REACTOME Identifiers
#198
beasleyjonm
opened
1 year ago
1
Replace status badge in README
#197
gaurav
closed
1 year ago
0
Update Redis backend
#196
gaurav
closed
1 month ago
3
Bump httpx from 0.19.0 to 0.23.0
#195
dependabot[bot]
closed
7 months ago
0
Bump requests from 2.28.1 to 2.31.0
#194
dependabot[bot]
closed
7 months ago
0
fixed ordering bug
#193
cbizon
closed
1 year ago
0
Restore partial load messages
#192
gaurav
opened
1 year ago
1
Improve error messages from NodeNorm
#191
gaurav
opened
1 year ago
0
Order of types incorrect
#190
cbizon
closed
1 year ago
2
Type 2 diabetes conflated with coronary artery disease and other concepts
#189
amykglen
opened
1 year ago
1
Incomplete normalization of 'abdomen'
#188
amykglen
closed
9 months ago
1
Add "preferred" identifiers to bulk download
#187
amykglen
opened
1 year ago
2
Updated data_files in configuration with all compendia files
#186
gaurav
closed
1 year ago
0
Bulk download of SRI NN data only contains Genes and Proteins?
#185
amykglen
closed
1 year ago
4
Batching fetch eq
#184
YaphetKG
closed
1 year ago
0
Gunicorn bump
#183
YaphetKG
closed
1 year ago
0
Missing Information Content
#182
EvanDietzMorris
opened
1 year ago
2
Add citation for NodeNorm as a CITATION.cff
#181
gaurav
opened
1 year ago
0
Remove try blocks that make debugging harder
#180
gaurav
opened
1 year ago
0
Certain 'PR:' curies throw "Error occurred during processing" on /get_normalized_nodes
#179
amykglen
closed
1 year ago
4
/get_semantic_types inop?
#178
edeutsch
opened
1 year ago
2
Added GitHub Action for releasing a Docker image on releases
#177
gaurav
closed
1 year ago
0
ERROR:node_normalizer.normalizer:Exception: 'NoneType' object has no attribute 'startswith'
#176
gaurav
opened
1 year ago
0
NodeNorm ITRB Prod suffering intermittent request failures (503s and 504s)
#175
gaurav
closed
1 year ago
2
Come up with a redundant NodeNorm/NameRes instance for use in case of downtime
#174
gaurav
closed
7 months ago
1
Previous
Next