Gaussian PSF should be made faster and easier for 2D training

TuragaLab / DECODE

This is the official implementation of our publication "Deep learning enables fast and dense single-molecule localization with high accuracy" (Nature Methods)

GNU General Public License v3.0

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Gaussian PSF should be made faster and easier for 2D training #181

Closed Haydnspass closed 1 year ago

Haydnspass commented 2 years ago

The gaussian PSF should implement:

Easy astigmatic sigma calculation
Device attribute
ROI-wise calculation (to allow for cutoff) -- means that we need an ROI to frame reduction globally available (possible changes to spline)