EDA: Resistome-1 missing WGS data

[asizemore]

Using a local eda backend setup, noticed that in the Resistome-1 study the wgs variables are missing.

Sent: GET request to http://localhost:8080/studies/Resistome-1 (local subsetting service)

Relevant portion of response:

                {
                    "id": "EUPATH_0000609",
                    "idColumnName": "Sample_stable_id",
                    "displayName": "Sample",
                    "displayNamePlural": "Samples",
                    "description": "No Entity Description available",
                    "children": [
                        {
                            "id": "OBI_0001051",
                            "idColumnName": "DNAExtract_stable_id",
                            "displayName": "DNA extract",
                            "displayNamePlural": "DNA extracts",
                            "description": "The output of an extraction process in which DNA molecules are purified in order to exclude DNA from organellas.",
                            "children": [
                                {
                                    "id": "OBI_0002623",
                                    "idColumnName": "WholeMetagenomeSequencingAssay_stable_id",
                                    "displayName": "whole metagenome sequencing assay",
                                    "displayNamePlural": "whole metagenome sequencing assays",
                                    "description": "A DNA sequencing assay that intends to provide information on the DNA sequences of multiple genomes (a metagenome) from different organisms present in the same input sample.",
                                    "children": [],
                                    "variables": []
                                }
                            ],
                            "variables": []
                        }
                    ],

[wbazant]

Should be good soon