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VirtualFlyBrain
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VFB_connect
A library for querying VFB servers (neo4j, owlery, solr)
GNU General Public License v3.0
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[Snyk] Security upgrade tornado from 6.2 to 6.4.2
#233
Robbie1977
opened
3 days ago
0
plotting neurons and their downstream partners has broken
#232
Clare72
opened
4 days ago
0
clearing out parent paths before moving on
#230
Robbie1977
closed
1 month ago
0
Reducing depth of parent subclass search
#228
Robbie1977
closed
1 month ago
0
Fix for duplicates in parents
#227
Robbie1977
closed
1 month ago
0
Summaries of connectivity at the type level.
#226
dosumis
opened
2 months ago
0
add get_cell_types_by_genes function
#225
Clare72
opened
2 months ago
0
gene counts for scRNAseq
#224
Clare72
opened
2 months ago
0
Tutorial to show off transcriptomics queries and analysis
#223
dosumis
opened
2 months ago
0
colour selection
#222
Clare72
opened
2 months ago
0
Add query for cell type by gene expression.
#221
dosumis
opened
2 months ago
0
Adding pulling of individual synapses
#220
Robbie1977
opened
2 months ago
0
colour minimum distances
#219
Clare72
opened
2 months ago
0
removing white from the random colour selection
#217
Robbie1977
closed
2 months ago
0
fix to ensure default return type set
#215
Robbie1977
closed
2 months ago
0
ensuring strings are used for acc used in neo4j
#214
Robbie1977
closed
2 months ago
0
Only showing vfb. help if launched that way
#213
Robbie1977
closed
2 months ago
0
New version pub query
#209
dosumis
closed
2 months ago
0
Improved handling of xrefs
#208
Robbie1977
closed
2 months ago
0
match links on accession and don't make lists
#207
Clare72
closed
2 months ago
0
increase output of get_transcriptomic_profile
#204
Clare72
closed
2 months ago
0
[Snyk] Fix for 7 vulnerabilities
#203
Robbie1977
closed
2 months ago
0
allowing limit of DBS to data source
#202
Robbie1977
closed
2 months ago
0
[Snyk] Fix for 10 vulnerabilities
#201
Robbie1977
closed
2 months ago
0
updating to latest req
#199
Robbie1977
closed
2 months ago
0
Speedup on id lookup
#197
Robbie1977
closed
2 months ago
0
include symbols in templates
#195
Robbie1977
closed
2 months ago
0
Fixed by in connected_neuron_by_type
#194
dosumis
closed
2 months ago
2
adding version reporting vfb.__version__
#193
Robbie1977
closed
2 months ago
0
handling unsortable results
#191
Robbie1977
closed
2 months ago
0
Print black colour for None
#190
Clare72
closed
2 months ago
0
Fix for default template and merged thumbnail plots
#188
Robbie1977
closed
2 months ago
0
get_dbs fix for symbols
#186
Robbie1977
closed
2 months ago
0
Update README.md
#185
Robbie1977
closed
2 months ago
0
new neuron pub query
#184
dosumis
closed
2 months ago
0
Forcing numpy < 2.0.0
#182
Robbie1977
closed
2 months ago
0
Fix for single string calls on vfb.terms()
#181
Robbie1977
closed
2 months ago
0
fix get_nt_receptors_in_downstream_neurons bringing in extra classes from individuals of downstream_type
#178
Clare72
closed
2 months ago
0
adding solr search function
#176
Robbie1977
closed
2 months ago
0
Fixed get_connected_neurons_by_type
#175
dosumis
closed
2 months ago
4
improvements to colour choices for plots
#174
Clare72
closed
2 months ago
0
only supports major version
#172
Robbie1977
closed
2 months ago
0
vfb.terms breaking changes in interface
#169
jefferis
closed
2 months ago
0
vfb.term - optionally restrict by gross type
#168
dosumis
closed
2 months ago
1
template default fix
#167
Robbie1977
closed
2 months ago
0
Predicted NTs
#166
Clare72
closed
3 months ago
0
Adding pulling synapses from source servers and aligning to template.
#165
Robbie1977
opened
3 months ago
0
Fix for NoneType issue in python 3.9
#163
Robbie1977
closed
3 months ago
0
General bug fixes and dependency version resolving
#161
Robbie1977
closed
3 months ago
0
Dependancy fixes and global load limit
#159
Robbie1977
closed
3 months ago
0
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