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Vitek-Lab / MSstats

R package - MSstats
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modelBasedQCPlots missing protein name #115

Open Radio-Controlled opened 4 months ago

Radio-Controlled commented 4 months ago

When running the modelBasedQCPlots function, the output is missing the protein names in the title, so eg instead of "Normal Q−Q Plot ( A2AAJ9 )" it now says "Normal Q−Q Plot ( )". The plots themselves are still the same however.

mstaniak commented 4 months ago

Hi, thanks for reporting, I'll check and fix this problem soon.

Radio-Controlled commented 4 months ago

Thank you for looking into it!

As an aside, I have also been having some issues with using MSstatsPTM, but here I'm not sure if it's an issue with the code or with my implementation. Is there a forum or other avenue where I could ask for feedback regarding this?

mstaniak commented 4 months ago

Regarding MSstatsPTM, please either use the google group https://groups.google.com/u/2/g/msstats or leave an issue at Vitek-Lab/MSstatsPTM.