YerevaNN mimic3-benchmarks issues

YerevaNN / mimic3-benchmarks

Python suite to construct benchmark machine learning datasets from the MIMIC-III 💊 clinical database.

https://arxiv.org/abs/1703.07771

MIT License

805 stars 329 forks source link

issues

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add sociodemographics

#145 evakeller closed 3 weeks ago
0
Height as time-series infromation?

#144 aj280192 opened 4 months ago
0
How to manage the newer packages to run the benchmark dataset correctly ?

#143 Hank-Tang opened 7 months ago
0
raise KeyError(f"{not_found} not in index")

#142 daiyl opened 8 months ago
0
Question about metric alignment

#141 yzhHoward closed 10 months ago
1
Bump tensorflow from 1.15.0 to 2.11.1

#140 dependabot[bot] opened 1 year ago
0
ihm.pkl files differ and lot of missing values in an episode

#139 sivakumarlakkoju opened 1 year ago
6
ValueError: Use `.rename` to alter labels with a mapper.

#138 chaichd opened 1 year ago
0
Removes colons for normalizer filenames for windows compatibility

#137 syfantid closed 1 year ago
1
Rename files with colon in the name for Windows compatibility

#136 syfantid closed 2 years ago
0
Project dependencies may have API risk issues

#135 PyDeps closed 1 year ago
1
update pandas and yaml to fix age issue

#134 rrmhearts closed 1 year ago
1
ValueError: time data '2109-03-20' does not match format '%Y-%m-%d %H:%M:%S'

#133 liugaohong closed 1 year ago
1
ValueError: Failed to find data adapter that can handle input

#132 Artchyy opened 2 years ago
1
Replace add safe Loader argument to yaml load (suppresing the warning message) "mimic3-benchmarks/mimic3benchmark/scripts/extract_subjects.py", …

#131 partizanos closed 1 year ago
1
the imp module is deprecated in favour of importlib

#130 Artchyy closed 2 years ago
0
Overflow in int64 addition

#129 zoevas closed 2 years ago
5
replication of model prediction - deviation of ~2% random seeds missing

#128 partizanos opened 2 years ago
0
Request to publish repository in papers with code

#127 partizanos opened 2 years ago
1
Experiment

#126 drdileepunni closed 1 year ago
1
requirement.txt does not work

#125 yx8njit closed 2 years ago
1
Mismatch between DEATHTIME and OUTTIME

#124 hugoych opened 2 years ago
0
How to trace back array entries to the actual features used?

#123 kohkev closed 2 years ago
0
ValueError: '0' is not in list

#122 Ownspirit opened 2 years ago
0
hcup_ccs_2015_definitions.yaml issue

#121 DongHyukHwang closed 2 years ago
0
ValueError: Could not interpret optimizer identifier: 0.9

#120 joaofonseca9 closed 2 years ago
2
Support for newer versions of libraries

#119 vadim0x60 closed 1 year ago
2
No such file 'data/root/85404/stays.csv'

#118 Dongximing opened 3 years ago
0
AttributeError: module 'keras.backend' has no attribute 'observe_object_name'

#117 kohkev closed 3 years ago
1
How to get ICD9-code according to each timestamp for per patient?

#116 Blackzxy opened 3 years ago
1
Question about origin of hcup_ccs_2015_definitions.yaml

#115 RJBeetel3 closed 3 years ago
2
Documentation for length of stay regression backwards

#114 alanflanders opened 3 years ago
1
Question about categorical channels in LSTM input features

#113 EduCasta opened 3 years ago
0
Subjects without any events are included in the final dataset

#112 jenka13all closed 3 years ago
1
About min(+P, Se) metric.

#111 qkrdmsghk closed 2 years ago
2
freezing when run linear regression on length of stay

#110 xiuwei1026 closed 1 year ago
2
ValueError: Could not interpret optimizer identifier: 0.9

#109 xiuwei1026 closed 1 year ago
4
Unable to understand input data transformation

#108 sarwart opened 3 years ago
0
The program runs too slowly

#107 wushangbin opened 3 years ago
3
Any suggestion for building mimiciv benchmark?

#106 finnickniu opened 3 years ago
1
128 diagnosis labels

#105 yya518 opened 3 years ago
2
About itemid_to_variable_map.csv and variable_ranges.csv table

#104 Yuz998 opened 3 years ago
1
Time-data issue

#103 etsi123 closed 1 year ago
8
Datetime issues with preprocessing

#102 davzaman closed 1 year ago
4
Missing diagnosis labels in episode*.csv generated by `extract_episode_from_subjects`

#101 mistycheney opened 4 years ago
1
Phenotyping task generated data has missing labels

#100 GuilhermeRamos331 opened 4 years ago
0
The number of the variables is still 17 in this version?

#99 KimballCai closed 1 year ago
1
Possible issues in the preprocessing of Glasgow coma scale?

#98 momih closed 1 year ago
1
Is there a mapping between hadm_id and episode?

#97 johntiger1 opened 4 years ago
3
Extract episodes: rename() got an unexpected keyword argument "axis"

#96 nicenoize closed 4 years ago
2