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YinLiLin / CMplot

📊 Circular and Rectangular Manhattan Plot
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Give gap between ends to label each circle #10

Open manjusst opened 5 years ago

manjusst commented 5 years ago

Hi Lilin, Hope you are doing good. I made nice plots, thanks for the package. But I am confused about how to provide the space to label each circle. I have attached an example file where each circle is labeled as a b c d.. Example Picture

Could you please help me out. Kind regards, Manjusst

YinLiLin commented 5 years ago

Hi Manjusst,

I would prefer you to give a text explanation for each circle under the figure, as it may break the integrity of circle if you give gap in it. Anyway, i will modify the codes of CMplot for you if you really need the requirments.

Best, Lilin

manjusst commented 5 years ago

Hi Lilin, It would be great to give a try. Please could you please provide me the code, I will be eagerly waiting. Thank you very much for your kind response. Regards, Manjunath

YinLiLin commented 5 years ago

Hi Manjunath,

Would you mind send me your email address? I will send you the modified script if I finished.

Lilin

manjusst commented 5 years ago

Hi, Good morning. My address is manjusst@gmail.com Cheers, Manju

On Fri, Aug 23, 2019, 6:33 AM Lilin Yin notifications@github.com wrote:

Hi Manjunath,

Would you mind send me your email address? I will send you the modified script to you if I finished.

Lilin

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/YinLiLin/R-CMplot/issues/10?email_source=notifications&email_token=ALCHCXWXSRT7KRXDTRLZIKDQF4ZPFA5CNFSM4INQ5WWKYY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOD462FHY#issuecomment-524133023, or mute the thread https://github.com/notifications/unsubscribe-auth/ALCHCXWS3E3T6QQXIYHYYGTQF4ZPFANCNFSM4INQ5WWA .

manjusst commented 5 years ago

Hi Lilin, I was waiting for your reply, I thought you might have missed it. Kind regards, Manjunath

YinLiLin commented 5 years ago

Dear Manjunath,

Sorry for that, I am a little busy dealing with my works in hand those days, so I haven't got a chance to do it. But I ensure that I will send you the updated scripts at the end of this week. Sorry again for delay on your projects.

Best, Lilin

manjusst commented 5 years ago

Hi Lilin, Thank you for your prompt reply. I understand your priorities. Thank you. With regards,

Manjunath Prasad, C. T.

ScientistDivision of Seed Science and Technology

Indian Agricultural Research Institute

New Delhi-110 012

Mobile: +91 9968172254

REDEMPTION

  1. If you are not the intended recipient, please ignore the e-Mail and delete it immediately and notify the sender.

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On Tue, Aug 27, 2019 at 4:51 PM Lilin Yin notifications@github.com wrote:

Dear Manjunath,

Sorry for that, I am a little busy dealing with my works in hand those days, so I haven't got a chance to do it. But I ensure that I will send you the updated scripts at the end of this week. Sorry again for delay on your projects.

Best, Lilin

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/YinLiLin/R-CMplot/issues/10?email_source=notifications&email_token=ALCHCXQCSQURJQRYZN4STNDQGUE2JA5CNFSM4INQ5WWKYY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOD5HMWHQ#issuecomment-525257502, or mute the thread https://github.com/notifications/unsubscribe-auth/ALCHCXTPNAUS3FLWDWSWHU3QGUE2JANCNFSM4INQ5WWA .

manjusst commented 4 years ago

Hi Lilin, Would you still like to help me out with my earlier request? Thanks. Manjunath

YinLiLin commented 4 years ago

Hi Manjunath,

Do you mean the script I modified for giving gap in each circle? I remembered that I have sent it to you at the earlier day.

Best, Lilin

manjusst commented 4 years ago

Dear Lilin, Hope you and your family is safe and well. The covid-19 has is a real problem here in India now. Sorry, I think you have not shared, or maybe I missed it. Can you please help me with this? This is quite important for me. Thank you. With regards,

Manjunath Prasad, C. T.

ScientistDivision of Seed Science and Technology

Indian Agricultural Research Institute

New Delhi-110 012

Mobile: +91 9968172254

REDEMPTION

  1. If you are not the intended recipient, please ignore the e-Mail and delete it immediately and notify the sender.

  2. The sender is not liable for any virus/malware transmitted to your computer and loss(es)/damage(es) occured thereby while/after opening this e-Mail and attachments thereto.

On Mon, Jul 6, 2020 at 3:55 PM Lilin Yin notifications@github.com wrote:

Hi Manjunath,

Do you mean the script I modified for giving gap in each circle? I remembered that I have sent it to you at the earlier day.

Best, Lilin

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/YinLiLin/CMplot/issues/10#issuecomment-654149675, or unsubscribe https://github.com/notifications/unsubscribe-auth/ALCHCXRRMXND4MBV3VH46NLR2GRAPANCNFSM4INQ5WWA .

YinLiLin commented 4 years ago

Hi Manjunath,

I have just sent it to you again at manjusst@gmail.com. Please check it.

Best, Lilin

manjusst commented 4 years ago

Hi Lilin, I had replied asking some more help. Please have a look. Thank you in advance. Manju

YinLiLin commented 4 years ago

Hi Manjunath,

Sorry for the late response, as I am busy in preparing my PhD dissertation and some related materials in recent weeks. I have viewed the two types of circular Manhattan plots attached on the email. Technologically, it is hard to integrate both trait names and y-axis into a big gap, and I preferred not to insert the trait names in each circle, since the big gap would break the integrity and symmetry of the circle. So I suggest to use the default output without a gap and give detailed explanatory notes under the figure.

Best, Lilin

manjusst commented 4 years ago

Dear Lilin Yin, Thank you for your suggestion. Ok, I will retain the old graph. All the best with your thesis. Cheers, With regards,

Manjunath Prasad, C. T.

ScientistDivision of Seed Science and Technology

Indian Agricultural Research Institute

New Delhi-110 012

Mobile: +91 9968172254

REDEMPTION

  1. If you are not the intended recipient, please ignore the e-Mail and delete it immediately and notify the sender.

  2. The sender is not liable for any virus/malware transmitted to your computer and loss(es)/damage(es) occured thereby while/after opening this e-Mail and attachments thereto.

On Wed, Jul 8, 2020 at 2:53 PM Lilin Yin notifications@github.com wrote:

Hi Manjunath,

Sorry for the late response, as I am busy in preparing my PhD dissertation and some related materials in recent weeks. I have viewed the two types of circular Manhattan plots attached on the email. Technologically, it is hard to integrating both trait names and y-axis into a big gap, and I preferred not to insert the trait names in each circle, since the big gap would break the integrity and symmetry of the circle. So I suggest to use the default output without a gap and give detailed explanatory notes under the figure.

Best, Lilin

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/YinLiLin/CMplot/issues/10#issuecomment-655401681, or unsubscribe https://github.com/notifications/unsubscribe-auth/ALCHCXVL2YJ54KO2QK3F353R2Q3JNANCNFSM4INQ5WWA .