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aces / brainbrowser

Web-based visualization tools for neurological data.
https://brainbrowser.cbrain.mcgill.ca/
GNU Affero General Public License v3.0
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How can I paint or show each of the 14 areas that the brain has. #337

Open YeisonVelez11 opened 6 years ago

YeisonVelez11 commented 6 years ago

I would appreciate it if you can tell me how.

https://feelthebrain.files.wordpress.com/2015/10/neuroanatomy_large.jpg

lblewis commented 6 years ago

If you already have that particular surface atlas that you linked to in .txt format for a particular individual's or group average surface (.obj) (or for FS, in binary or .asc formats), you can load it as "Per vertex Data." I am not familiar with that particular atlas, but CIVET (for example) automatically registers each subject to one of 3 possible atlases: Lobes (default), or you can chose DKT or AAL:

http://www.bic.mni.mcgill.ca/ServicesSoftware/VisualGuides http://www.bic.mni.mcgill.ca/ServicesSoftware/CIVET-2-1-0-Basic-Usage-of-CIVET#SurfaceOptions

Then look in the subject's output folder:

verify/*atlas.png