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aehrc
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VariantSpark
machine learning for genomic variants
http://bioinformatics.csiro.au/variantspark
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Additional support for prediction
#191
piotrszul
opened
3 years ago
1
Add prediction command in cli.
#190
piotrszul
closed
3 years ago
0
Align python formatting with InteliJ and remove python2 support.
#189
piotrszul
closed
3 years ago
0
Align python code formatting between pylind and inteliJ
#188
piotrszul
closed
3 years ago
0
Make pull request to hail with jar config changes.
#187
piotrszul
closed
9 months ago
0
Update hail version to 0.2.61
#186
piotrszul
closed
3 years ago
0
Align code style checks with IntelJ fomatting
#185
piotrszul
closed
9 months ago
0
Migrate CI to Github Actions
#184
piotrszul
closed
3 years ago
0
Migrate CI to Github Actions
#183
piotrszul
closed
3 years ago
0
Release v0.3.0
#182
piotrszul
closed
3 years ago
0
Added version into to cmd line and hail python.
#181
piotrszul
closed
3 years ago
0
Add version information to command line and python interfaces
#180
piotrszul
closed
3 years ago
0
Remove incomplete docs contents.
#179
piotrszul
closed
3 years ago
0
Trim the documentation
#178
piotrszul
closed
3 years ago
0
Cleanup readthedocs setup.
#177
piotrszul
closed
3 years ago
0
Fix hail package documentation at read the docs.
#176
piotrszul
closed
3 years ago
0
Updated pydocs for hail integration
#175
piotrszul
closed
3 years ago
0
Added a simple mode based imputation in python hail interface.
#174
piotrszul
closed
3 years ago
0
Update/write python docs for hail interface
#173
piotrszul
closed
3 years ago
0
Update documentation and notebooks for version 0.3
#172
piotrszul
closed
3 years ago
0
Update documentation and examples for 0.3 release.
#171
piotrszul
closed
3 years ago
0
Error when loading json model
#170
BMJHayward
closed
9 months ago
1
168 Train rf cmd
#169
BMJHayward
opened
4 years ago
0
Separate training command
#168
BMJHayward
opened
4 years ago
0
140 Predict cmd in CLI
#167
BMJHayward
closed
3 years ago
0
Bump junit from 4.12 to 4.13.1
#166
dependabot[bot]
closed
3 years ago
0
Clustering sample
#165
TaniaCuppens
closed
9 months ago
2
uncalled genotype issue
#164
ArashBayatDev
closed
3 years ago
1
[#161] Added classCounts to the DecisionTree model and JSON representation
#163
piotrszul
closed
4 years ago
0
#160 Web Visualiser
#162
ArashBayatDev
closed
4 years ago
0
num Case/Control in JSON model file
#161
ArashBayatDev
closed
9 months ago
2
Visualize Trees
#160
ArashBayatDev
closed
9 months ago
1
#158 Aws Marketplace
#159
ArashBayatDev
closed
4 years ago
0
Add instruction on how to use VariantSpark available on AWS Marketplace
#158
ArashBayatDev
closed
1 year ago
0
#156 JsonRfAnalyser (Command Line Tree View)
#157
ArashBayatDev
closed
4 years ago
0
Tree View of the output JSON RandomForest model.
#156
ArashBayatDev
closed
9 months ago
1
Variable mTry at each node
#155
ArashBayatDev
opened
4 years ago
1
Variable training parameter
#154
ArashBayatDev
closed
9 months ago
1
Metadata in model files
#153
ArashBayatDev
opened
4 years ago
0
Report Training process in Hail interface
#152
ArashBayatDev
closed
2 years ago
0
Merge Multiple RandomForest Model Files
#151
ArashBayatDev
opened
4 years ago
0
RandomForest Model Java <-> R
#150
ArashBayatDev
closed
9 months ago
1
RandomForest Model Java <-> JSON
#149
ArashBayatDev
opened
4 years ago
1
Decouple Training and Association
#148
ArashBayatDev
closed
9 months ago
1
Saving RandomForest model continuously after each batch of trees
#147
ArashBayatDev
opened
4 years ago
0
Fix compiler warnings including deprecation
#146
piotrszul
opened
4 years ago
0
#143 Add scalastyle and fix InteliJ warnings
#145
piotrszul
closed
4 years ago
0
How to de-serialise a previously stored model
#144
BMJHayward
closed
4 years ago
1
Add scalacheck and fix other warnings in the code
#143
piotrszul
closed
4 years ago
0
[#141] Format code with scalafmr
#142
piotrszul
closed
4 years ago
0
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